Gene Lreu_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1799 
Symbol 
ID5189455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1851098 
End bp1852390 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content41% 
IMG OID640591644 
Producthypothetical protein 
Protein accessionYP_001272375 
Protein GI148545005 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAG GTGACTTCCT GGCACGGTTA CATCAAAATG ACGGAAGCGA TAATCATGTA 
ACGTCCGCAC AACAGATTAG GAAGGCAATT ATTAGCATCC TTCAAAAACA GCGCCTTTTC
GGAGAAGTGT TATTACAACT TCCACGAGAG AATGATTTAC AGTTACCCGC AATGATGGGA
TTGAGGTGGG AAGACAATCA CCTTGTACTG GTTATTAATC CAGAAAAGTT AGTGCACGTT
CGTAATGATG AACTTCAAAG CTTATTAGAA CATGAAGCCC TTCACCTTAT CTGGATGCAT
CCATTACGTT ATGCTTCTTA TCCTCATCAA GATTTAGTCC AGATTGCAAC CGATGTAGCG
GTAAACCAGT ATTTAACTGA GTCACCCCAG GGAACAGTAA CCCTTAGCCA ATTGGAAAAG
GTTCTTCGTC AAAAGCTAAT GCCAAAATTA GATTCGCAGG ATTATCTCAA TATATTAGAA
CAGCTGCCTG CTGAACAACA AGAAAAACTA CATCAGCCAG GCCTTAATTT GAATGGCAGC
AAACAAAAGG AAAATGCAAC GGCAGATGAG GTTAAAACAG CCGATACTCA TAACGGCTGG
CAGGAACCTA AGACAAGTCA ACAGGTCAGC AATCAGGTCG TACGCTTAGC GAATATTAAG
CGGATTTTGA ATCGTTCTTG GAAGCAAACC CCGCAACGAG ATCGCGGTTT ATTACCAGGA
AATGTAAAAG CACAGTTGCA AAAAGCGCAC CAAACCAAAA TAGTTGATTG GCGGCAGGTT
CTTAGGCATC AGTTTGGGTT GATTGCACGA GGACAAGTTA ATTCGCATGC TCGCTTTAAT
CGCCGGCAAC CATTGCGAAT GGATTTGCCT GGCAAAGTTA CGAGATTGGA TCCGGCTGTT
GACATTTTTG TTGATAATTC CGGATCAGTC ACCGATCAAG AAATCGTTCA AACACTAACG
ACGCTTGAAA AGATGCTTAA GAAAACGAAA CTGACAGCTA ACGTTTACTC GTTTGATGCC
CGGGTGACTG CCAAGCAAAA ACTACATGAT GGTAAAAAAC TTGATTTTAG ACGAACTGGT
GGCGGGGGTA CAAGTTTTCA ATGTGTTTTT GACTATCTCC ATCTGCACCA CCTAACTAAA
CGAAATCGCA TAATTATCAT TATTACTGAT GGGTGGGGAG AGGAACGAAT CAATAATTAT
CATTATCAAA ATGTTTATTG GCTAATGATG ACAAAGGCTA ATCAATTATC AGTAAAAGAG
CCACCGGGAA GAGTATTAGA AATGAGGGGA TAA
 
Protein sequence
MSLGDFLARL HQNDGSDNHV TSAQQIRKAI ISILQKQRLF GEVLLQLPRE NDLQLPAMMG 
LRWEDNHLVL VINPEKLVHV RNDELQSLLE HEALHLIWMH PLRYASYPHQ DLVQIATDVA
VNQYLTESPQ GTVTLSQLEK VLRQKLMPKL DSQDYLNILE QLPAEQQEKL HQPGLNLNGS
KQKENATADE VKTADTHNGW QEPKTSQQVS NQVVRLANIK RILNRSWKQT PQRDRGLLPG
NVKAQLQKAH QTKIVDWRQV LRHQFGLIAR GQVNSHARFN RRQPLRMDLP GKVTRLDPAV
DIFVDNSGSV TDQEIVQTLT TLEKMLKKTK LTANVYSFDA RVTAKQKLHD GKKLDFRRTG
GGGTSFQCVF DYLHLHHLTK RNRIIIIITD GWGEERINNY HYQNVYWLMM TKANQLSVKE
PPGRVLEMRG