| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1793 |
|---|
| Symbol | |
|---|
| ID | 5190108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1844719 |
|---|
| End bp | 1846212 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640591638 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001272369 |
|---|
| Protein GI | 148544999 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.734015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG TTTGGACATG GGATGTTGTT CGCCGCATTA TTGAAGTCCT ATGGTTAATT
AACATTGCTT TTGCAGTATG GACCGTTTTT CGTAGTCGTC GGGATATTGC ATCAACTTGG
GCTTGGCTAT TAGTCTTAAC TATTTTGCCA GTAGTTGGAT TTATCCTATA TCTTTTTGTG
GGACGACAAT TATCCCATGA TGAGATATTT AGTATTCAAG ATGAGCAAAA ACAATTACGG
ACCAAATATC TTGAAAAGCA ACGAAAGCTA AGTGAAGAGC ATGAGTTAAT GCCAAAAGGG
AGCCGGTTGT CACGCGATCG CCAGTTGGTT AACCTTTTTT TGAGTTTGAA TGATTCAGTA
GTAACCTTTA ATAATAAAGT TCACGTATTT ATTGATGGGA AAAAGAAGTT TGATAAGTTA
ATTGATGATA TAAATCATGC AACTGATCAT GTATATATTG AATACTATTC CTTTTATGCT
GATAATCTAG GGAAGCGGGT GTTGGCAGCC TTAGAAGATG CAGCTGCCCG AGGAGTAAAA
GTCCGCGTTC TCTATGACTT AAGTGGGTCT CATGGAACTA CTTTCAAATT TTTTAAGCAT
TTAGAAGAGT TGGGTGGAGA AGCGCAAGCA TTTATTGCCG CTGCCAAAGC TTATTTTCAA
ACGCCACGGT TAAACTACCA TCTTCACCGT AAACTAGCTA TTATCGATGG CAAGATTGGT
TATATTGGTG GATTCAATAT CGGTGATCAA TACCTTGGCG AAGATCCGAA GTTTGGTTAT
TGGCGTGATA CCCATCTTCG TGTCGTCGGA CAAGCAACGA TGATGATGAC GGTGCGGTTT
GCGATGGACT GGAATACAAC TTGTCGGAAA ACTCATAAAA AGAAAATTGA CCTTGAAAAA
GAATTTAAGA ATTTTGAACT GGTTGCACCA GATGGCGATC CAGATGAGGT TCCAATGCAA
ATCGTATCTT CTGGACCGGA TAATGAAAAT TATTCGATTC GACGGGGATA TGAATCAATT
ATTAGCTCAG CGCGAAAATA TGTTTATATT CAATCACCAT ACCTTATTCC AGAAGATTCA
GTGCTGGAAG CATTAGTAAT TGCCGCAAGA AGTGGAATTG ACGTCCGAAT TATGATCCCA
TGCATGCCTG ATCATCCATT TGTTTATCGG GCAACGGAAT ATTATGCTAA ATACTTAGTG
AACAATGGGG TAAAAGTTTA CAAGTACGAT AATGGCTTTA TTCATTCAAA GACGATGGTT
AGTGGGAGCA ACATTGCTTC TGTTGGTTCG GCAAATATGG ATTACCGTAG TTTTAGACTT
AATTTTGAAG TCAATGCATT TGCGTACAAT GAAAAACTAA CAGCGCAGTT AAAGAAAGAC
TTTGAAAATG ATATGAAAAA GAGTACTTTA CTTACTCCTG AGTATTTTGC TAATCAATCA
AAGTGGCGGA AATTCAAGCA ATACTTTTCT CGCTTACTTT CACCAATTTT ATAA
|
|---|
| Protein sequence | MDIVWTWDVV RRIIEVLWLI NIAFAVWTVF RSRRDIASTW AWLLVLTILP VVGFILYLFV
GRQLSHDEIF SIQDEQKQLR TKYLEKQRKL SEEHELMPKG SRLSRDRQLV NLFLSLNDSV
VTFNNKVHVF IDGKKKFDKL IDDINHATDH VYIEYYSFYA DNLGKRVLAA LEDAAARGVK
VRVLYDLSGS HGTTFKFFKH LEELGGEAQA FIAAAKAYFQ TPRLNYHLHR KLAIIDGKIG
YIGGFNIGDQ YLGEDPKFGY WRDTHLRVVG QATMMMTVRF AMDWNTTCRK THKKKIDLEK
EFKNFELVAP DGDPDEVPMQ IVSSGPDNEN YSIRRGYESI ISSARKYVYI QSPYLIPEDS
VLEALVIAAR SGIDVRIMIP CMPDHPFVYR ATEYYAKYLV NNGVKVYKYD NGFIHSKTMV
SGSNIASVGS ANMDYRSFRL NFEVNAFAYN EKLTAQLKKD FENDMKKSTL LTPEYFANQS
KWRKFKQYFS RLLSPIL
|
|---|
| |