| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1659 |
|---|
| Symbol | |
|---|
| ID | 5188483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1718970 |
|---|
| End bp | 1719725 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640591504 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001272235 |
|---|
| Protein GI | 148544865 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGTT TAGATAATAA AGTTGCAATT ATTACTGGTG GTTCTAAAGG AATTGGAGCT
GCTGTCGCAA AAAAGTTTAT CGAAGAAGGC GCAAAGGTTG TTTTAACCGC TCGGAAGATG
GATGAGGGAC AAAAAGTCGC TGACCAACTA GGTGACAATG CGATCTTTAT CCAACAAGAC
GTTGCTCGGA AAGGAGACTG GGACCGGGTA ATCCGCCAAA CTGTCCAAGT CTTTGGGAAG
CTCAATATTG TGGTTAACAA TGCGGGAATT GCCGAATACG CCGATGTTGA GAAGACGGAC
GCTGAAATTT GGGATAAAAC AATTGCCGTT AACCTTACCG GTACGATGTG GGGAACTAAG
CTCGGTATTG AAGCAATGAA GAACAACGGG GAAAAGAATT CAATCATCAA TATGTCATCC
ATTGAAGGAC TAATTGGTGA TCCTGATCTC TTTGCATACA ATGCTTCTAA GGGTGGTGTC
CGCCTCTTAA CTAAGTCCGC TGCGCTTGAT TGTGCCCGGA AAGGCTATGA CATCCGTGTA
AATACAATTC ATCCTGGTTA TATCTCAACT CCACTAGTTG ATAATTTGGT CAAGGATGAT
CCAAAAGCAG AAGGACACCT AGAAAGCCTT CATCCCCTTG GCCGTCTTGG AAAGCCAGAA
GAGATTGCTA ACCTCGCTTT ATACCTTGCT TCAGATGAAT CAAGCTTTAG TACTGGTTCG
GAATTTGTCG CTGATGGTGG CTATACGGCT CAATAA
|
|---|
| Protein sequence | MGRLDNKVAI ITGGSKGIGA AVAKKFIEEG AKVVLTARKM DEGQKVADQL GDNAIFIQQD
VARKGDWDRV IRQTVQVFGK LNIVVNNAGI AEYADVEKTD AEIWDKTIAV NLTGTMWGTK
LGIEAMKNNG EKNSIINMSS IEGLIGDPDL FAYNASKGGV RLLTKSAALD CARKGYDIRV
NTIHPGYIST PLVDNLVKDD PKAEGHLESL HPLGRLGKPE EIANLALYLA SDESSFSTGS
EFVADGGYTA Q
|
|---|
| |