| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1560 |
|---|
| Symbol | |
|---|
| ID | 5189093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1619360 |
|---|
| End bp | 1620121 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640591409 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_001272140 |
|---|
| Protein GI | 148544770 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG AAACGATTAA GCACCAATTA AACCATCGTA CAATTCGGGC CTTTAAGCCC
ACAACTCTTT CAACAGAACA ATTGAATACT CTTTACTCTG TTGCTAGTCA TACGCCAACC
AGTATGTTTA TGCAGCAAAT GTCAATTATG CACATTACCG ATCCAGATAA ACGGGCCGTA
ATCAGAGAAA TTAGTAAGCA ACCGTATGTC GGTGCAAACG GTGACCTGTT CATTTTGTTA
GTTGACCTTT ATCGTAACCA ACAAATACGA CAGCAAAAGG GCAAGGATGA TGGCCGTTTA
CATACCGCTG ATATTTTCTT CCAAGGCCTT GATGATGCAA TCATGGCTGC CCAAAACATG
ATTACTGCTG CCGAGAGTAT GGGCCTCAGC GTTGTTCCCC TTGGTTCAAT CAAAAATGAG
CCGCAAAAAA TCATCGAAGT CCTTAATCTC CCTAAAATGA CCTTCCCAGT TTTAGGCTTA
CAAATCGGTA TACCTGACCA AGAACCTCAA CTAAAGCCCC GCCTGCCATT AAAATTTATC
GCATTTGATA ATGACTATCC AAAAGAGATC AAGCTCAGTG ACTTAAGCGA TTATGATCAA
GAAGTTACTA CCTACTATGA CCTTCGTGAT GCCAACCAAC GAATTGATTC CTTCACCAAC
CAGATTGCGG GGGCTAAACT CGATCGCCAC TATACCAAGC GCGATGAAAT TATGAAGGTG
TTACACCGAC AAGGTCTTTG CACTGATGAA GGAATTGATT AG
|
|---|
| Protein sequence | MTNETIKHQL NHRTIRAFKP TTLSTEQLNT LYSVASHTPT SMFMQQMSIM HITDPDKRAV
IREISKQPYV GANGDLFILL VDLYRNQQIR QQKGKDDGRL HTADIFFQGL DDAIMAAQNM
ITAAESMGLS VVPLGSIKNE PQKIIEVLNL PKMTFPVLGL QIGIPDQEPQ LKPRLPLKFI
AFDNDYPKEI KLSDLSDYDQ EVTTYYDLRD ANQRIDSFTN QIAGAKLDRH YTKRDEIMKV
LHRQGLCTDE GID
|
|---|
| |