Gene Lreu_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1527 
Symbol 
ID5189127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1579918 
End bp1581285 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content44% 
IMG OID640591378 
Producthypothetical protein 
Protein accessionYP_001272109 
Protein GI148544739 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAAGG ATAAAGAGAT CTCAGCGAAT GATTTTGAGC CGACTGAACA TTTGTCTGAT 
AAGCATCATA TGGCGATTCC ATGGCATGAC TTTTTTACAA ACGATAATTT CACCCCTGCG
TATGAGGCTA ATTTAGTAGA ACGAGCAGCG ATTGTCGGGC GAATTGGATT AATGATGCTT
TCTTATGGAA CGGGGGCATG GCGAGTCCGT GATTCAATGA ATACAGTTGC CCGGACGTTG
AAAATGACTT GTTCAGTCGA TATTGGGTTA GTTTCCCTCG AATATACTTG TATGGATGCC
CACCATAGTT ACACGCAGGC AATATCTTTG CCAAGCACAA GCGTAAATAC GACAAAACTT
TCGCAGATGG AGCGATTTAT TAAAGAATTT GACCAGAATG GGAGCGAGAT GACAATTGGA
GAAATCCACT CCCGTTTGGA AGAAATCGCT CACTCAAAAG GAAATTACGC TCCTTACCAA
GTAGGACTAG CAGCTGCGCT GGCATGTAGC GCCTTCGTAT TTCTGCTGGG GGGTGGACCA
GTTGAAATGT TTTGTAGTTT TATCGGAGCT GGCCTCGGAA ACTATGTCCG CCGTAAGATG
ATTGACCATC ACATTACCTT ATTTGCGGGA GTAGCGGTCG CGGTTGCAGT TGCGTGTCTT
TCTTACCTGC TGGCCTTAAG TTTGATGCAA TTAACATTTA ATGTGAGTTC GCGTCATGAA
GCAGGGTATA TCGGCGCAAT GCTGTTTATT ATTCCGGGAT TTCCATTTAT TACTAGTGGC
CTTGATATTT CAAAACTTGA TATGCGGTCC GGGCTTGAAC GGATGACCTA TGCAATCGCA
ATTATTACAG TTGCTACATT GGTTGGGTGG ATTGTAGCAT TAATGGTTAA CCTGCGTCCT
GAGAATTTTC AAGCATTGCC CCTATCGGCA TTAATGCTCT TTTTACTCCG GCTGCCAGCC
AGCTTTTGTG GGGTATTTGG CTTCTCAATA ATGTTTAACA GTACGCCTAA AATGGCAGCT
ATTGCCGGTT GTATTGGTGC GATTGCTAAT ACCTTACGCT TAGAATTAAC GGACTTGACC
GGAATACCGG CAGGAGCAGC CGCATTTTTA GGGGCGTTAG TTGCCGGGTT ATTGGCATCG
ATTGTTAAAC GTAAGATTCA ATATCCGCAA ATTTCAATCA CGGTTCCATC GATTGTTATT
ATGGTCCCGG GACTTTATAT GTATCGGGCA ATGTATAATA TCGGTTTAAC TTCGATTAGT
GTAGGAACGC TTTGGATGAC CAAGGCGCTT ATGATTGTTG TATTCTTGCC AATGGGATTG
ATTGCTGCTC GTATTCTTAC AGATTCTAAG TGGCGACATA ATGGATAG
 
Protein sequence
MSKDKEISAN DFEPTEHLSD KHHMAIPWHD FFTNDNFTPA YEANLVERAA IVGRIGLMML 
SYGTGAWRVR DSMNTVARTL KMTCSVDIGL VSLEYTCMDA HHSYTQAISL PSTSVNTTKL
SQMERFIKEF DQNGSEMTIG EIHSRLEEIA HSKGNYAPYQ VGLAAALACS AFVFLLGGGP
VEMFCSFIGA GLGNYVRRKM IDHHITLFAG VAVAVAVACL SYLLALSLMQ LTFNVSSRHE
AGYIGAMLFI IPGFPFITSG LDISKLDMRS GLERMTYAIA IITVATLVGW IVALMVNLRP
ENFQALPLSA LMLFLLRLPA SFCGVFGFSI MFNSTPKMAA IAGCIGAIAN TLRLELTDLT
GIPAGAAAFL GALVAGLLAS IVKRKIQYPQ ISITVPSIVI MVPGLYMYRA MYNIGLTSIS
VGTLWMTKAL MIVVFLPMGL IAARILTDSK WRHNG