Gene Lreu_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1526 
Symbol 
ID5189217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1579252 
End bp1579905 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID640591377 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_001272108 
Protein GI148544738 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAG AATATCCGCC AACACTCCTG GCAGAGGTAA AAGAAAAAAC AAAGGATCGA 
CAATTAACAG GCTTTACTCC AGGTCAAGGA CCACTTAATC CAGACTTGAT GTTAGTAGGA 
GAGGCTCCTG GTCGTCATGA AGAAAAGGTA AATATTCCTT TTTCTGGTGC TTCCGGTCAA 
GAACTGATGA AATTGATTGA ATCAATCGGA TATTCGCGTT CAACCGTTTA TATTACCAGT 
GTAGTTCGTC AACGGCCTTA TAGTATTAAA AAGGTAGTTG ATAAGAAGAC GGGTGAAGTA 
ATTGAAAAAA AGCCTAACCG TACTCCCACT AAAAAAGAAG TCTTAGCATT TGCCCCTTTG 
TTTGATTGGG AACTAGCACA AGTTAAGCCG AAAATTATTG TTACGCTTGG CAATACGGCT 
TTACAACGGC TGCTTGGTAG TCAGGCTAAT ATTAGTAAGC TTCATGGGCA ACTTCTCCAC 
GAAAAAATTC AACGAACTAA TGATGCGCAT GATGGTTATG AGTTGACGGC TGACAAGCAT 
TGGATTATGC CAATGTATCA TCCGGCCGCA GTACTCTATG CCCGCCGATT GGAGCCTACT 
ATTAAAGCAG ATTGGCAACA GTTAGGGCAG GATATTAAGA AAATGAAAAA ATAA
 
Protein sequence
MIAEYPPTLL AEVKEKTKDR QLTGFTPGQG PLNPDLMLVG EAPGRHEEKV NIPFSGASGQ 
ELMKLIESIG YSRSTVYITS VVRQRPYSIK KVVDKKTGEV IEKKPNRTPT KKEVLAFAPL 
FDWELAQVKP KIIVTLGNTA LQRLLGSQAN ISKLHGQLLH EKIQRTNDAH DGYELTADKH 
WIMPMYHPAA VLYARRLEPT IKADWQQLGQ DIKKMKK