| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1521 |
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| Symbol | |
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| ID | 5189222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1572176 |
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| End bp | 1573048 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591371 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001272103 |
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| Protein GI | 148544733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA CGTGGATATA CCGAGGAACC GAACCGATTA AAATAAAGAA GTATCTTCAG
TCATTGGGGA TGGGGCATCG TTTATTTAAC GATCTTAAAA ACGGTGAAGG GGAATTCCTT
GTTGATCATC GGAAGGTACG GCCAACAACC CAGATTCTTC CTAATCAACC TTTAACCATT
AAGGCTCAAC CAGAATTAGC TGATGATACT GTTGAAAGTA GTAATGAGCC CTTAAATGTT
GTTTATGAAG ATGATAATTG GTTGGTAGTA GATAAGCCAG CAGGGGTGAC TTCTATCCCA
GGACCAACCG TTCAAAATGA TACGGTTTTA AATCGGGTAA AGGGATACTT AATCGCAAAT
AATTCTGCAG ATCTCCGCCC TCATTTAATT ACACGACTGG ATCGCTTTAC GGGGGGATTA
CTTCTTATCG CTAAGCATCA TATCGCCTCC AGTATGATCA GTCAGCAAGT GCAGCAACAT
CAAATGCTGA AGGAATATAC CGCTTTAGTA GAAGGACAGG TTATGGACGA GCATGGCGAG
ATTAACAAGC CGATTGGAAG AAAGGATGGG CAGGCTGCAC GGGTAATTGA CGAGAATGGG
CAACGAGCTT TGACCGAGTA TTGGGTTGAA GAACGAGGCG CAAAGTGGAC ACGAGTGCGG
GTAAGACTTC ACACTGGACG CACACACCAG ATCAGGGTTC ACTTTGCTGC TATTGGTCAT
TCCCTAATTG GTGACCATCT TTATGGCGGC GATACTAGTA AATATGATCA TCAGTTGCTT
CATGCAAGTA AAATTAGCTT TAACGATCCC TTCACCCTTA AACAAATGAC ATTTACCTCA
GAATTGCCTG CAGCATTTTT TGAATTAGTT TAA
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| Protein sequence | MENTWIYRGT EPIKIKKYLQ SLGMGHRLFN DLKNGEGEFL VDHRKVRPTT QILPNQPLTI
KAQPELADDT VESSNEPLNV VYEDDNWLVV DKPAGVTSIP GPTVQNDTVL NRVKGYLIAN
NSADLRPHLI TRLDRFTGGL LLIAKHHIAS SMISQQVQQH QMLKEYTALV EGQVMDEHGE
INKPIGRKDG QAARVIDENG QRALTEYWVE ERGAKWTRVR VRLHTGRTHQ IRVHFAAIGH
SLIGDHLYGG DTSKYDHQLL HASKISFNDP FTLKQMTFTS ELPAAFFELV
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