Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1418 |
Symbol | |
ID | 5188501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1473596 |
End bp | 1474447 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640591267 |
Product | ABC transporter related |
Protein accession | YP_001272004 |
Protein GI | 148544634 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATTA AGGCAAATAA TCTTACTAAA AGATACGGAA CAAAATTAGC TCTAGATAAC GTAAATTTAC AGATCGATCG CGGTCAATTA ATTGCTTACC TAGGTACTAA TGGTGCAGGA AAATCAACTA CTATCAATCT TCTTACTGGT TTAATGACGC CAACCTCCGG GATGATCGCA CGCCGTCAAG GAATAAAAAT TGGCGTTGTC TTCCAAGATA GCATTCTTGA TAAAGAGCTT TCAGTTAAAG ATAATCTTAA CTTTAGATCA AACTTATATC ATGAAGATCA TACTGAATGG GTTCACCATT TAATTAACTT AATGGGTCTC ACTCACTTTC TAAATCAGCG CTATGGAACA TTATCTGGGG GACAGCGACG AAGAGTTGAC ATCACTCGTG CCTTGATTAC TGACCCAGAT ATTCTTTTCC TTGATGAACC GACAACTGGA TTGGATTTAC AAACGCGACT TGTTATTTGG AACCTCCTTC AAAGGCTACA AAAGGAACAT GGTCTAACTA TTTTTCTAAC AACTCATTAC TTAGAAGAAG CCGAAAATGC CGATCAAATG TATATCTTAG AAAACGGCAA AATTTTAGTT TCTGGCTTAG CAACCGATAT TAAACAACAT TATGCACCAA CTAAATTAGT GGTTACAACA AATGGACATA AGCTACAAAC TAACTACTCT GAGAAACAAT TAACATCTCA AAAATTTTCT TTTGATGGTC TTAATTGTTC AGAAGTTATT ACATTACTAC ATAGCAATCA AGAATATATC ATTAACTTCT CATATACCCC CGGTTCAATT AACGATGCTT TTGTCAAAAT TACCGGAAAG GAGCTTCAAT AA
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Protein sequence | MLIKANNLTK RYGTKLALDN VNLQIDRGQL IAYLGTNGAG KSTTINLLTG LMTPTSGMIA RRQGIKIGVV FQDSILDKEL SVKDNLNFRS NLYHEDHTEW VHHLINLMGL THFLNQRYGT LSGGQRRRVD ITRALITDPD ILFLDEPTTG LDLQTRLVIW NLLQRLQKEH GLTIFLTTHY LEEAENADQM YILENGKILV SGLATDIKQH YAPTKLVVTT NGHKLQTNYS EKQLTSQKFS FDGLNCSEVI TLLHSNQEYI INFSYTPGSI NDAFVKITGK ELQ
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