Gene Lreu_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1306 
Symbol 
ID5188544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1351554 
End bp1353056 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content41% 
IMG OID640591148 
ProductDNA-repair protein 
Protein accessionYP_001271900 
Protein GI148544530 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGGC GAACATATAT GGCAATCGAT TTAAAATCAT TCTATGCTTC GGTCGAATGT 
ACTGAGTGTG GGCTCGATCC TTTAAACGCT AACCTCGTAG TTGCCGATGA ATCGCGAACT
AGTAAGACTA TTTGTCTCGC CGTCTCACCA GCTTTAAAAA AGTTTGGCGT TTCTGGTCGT
CCGCGATTGT ATGAGGTGGA ACAACGGGTA GCGTACTTGA ATAATCGTCG TGCCAAAGAA
ATGTCTCACC AGCGATTATC ACCAGTTGTT TCAATTTACC GGGATGAACT ATTAAAATCA
CCAGAACTTA AAATTGGTTA TAAGATCGCG CGCCCACGAA TGAATTTTTA TCTTGAAAAA
AGTGTCGCCA TCTATGAAAT TTATTTACGC TATTTACCAC CAGAAAAGAT CCACGTTTAT
TCTATTGATG AGGTAATGAT GGATATTACT GATTATCTTA ATGAATATCA TGTTAGTGCC
CGTTCTTTAG CTAAGGAAAT CATCCAAACG ATCAAAGCAG AGACCCAGAT TACTGCAACT
GCAGGAATTG GGACCAATCT TTTCTTAGCG AAAGTAGCGA TGGATATAGT AGCTAAACGG
ATTCCAGGGG ATGAAGACGG GGTCCGGATT GCACAGATGA ATGAACATAC TTTCCGCCGT
TACCTTTGGG CGCATCAGCC ACTAACAGAC TTTTGGCGAA TTGGCCCTGG ATATGCACGA
CGACTAAAAA AGCTAGGTCT TCATACAATG GGAGATATTG CTCGTTGTTC TTTGGGAAAG
TTATCTGATC CAATGAATGA AGAAGTATTA TACCGCGAAT TTGGAAAAAA TGCGGAAATC
ATTATTGACC ATGCGTGGGG ATATGAGTCA GCCACCATTA AAGATATCAA AAATTATCAT
TCATCAGATC ATGGGGTGTA TTCTGGGCAG GTGTTGCCTC GACCTTATAA CTTTACAGAA
ACCCGGTTAG TGATTCAAGA GATGGTTAAT TCATTAGCTC TCCAGTTAAC CAAGCAAAAC
TTAGTAACTG ATCAAGTAGC TTTAAGGGTC GCCTATGATG TTTCTAATAT ATCGGAGGAT
TACCAAGGAC CATTAGTGAC AGACTTCTAT GGACGCCAGG CGCCAAAGCC AATGCACGGA
AAAGCTAATC TTTCCTTACC GACTTCATCT GGGACAGAAT TGATGGAGGC ATTTATGAAG
TTATGTGATT CTGACCTTGA TCGGCGATTG ACAGCTCGTA AAATTACGGT AATAGCGAAC
AACCTTCTTT CACCACGACT TGCCCGATTG GCGAATTATA ATGAGCAGTT AGATTTATTT
ACGGACTCAA CGAAAAAACA TAAGAGTCGT TCCAAGGTTC AAGAAAAAGA TCAAAAACTA
CAAAGGCTTG TCCTTGATTT GCAAAATGAG TACGGTAAAA ACGCCATTAT TCGAGCGGCG
GATTTGAAAA AAGGTGCTAC TCTTTTGGAA AGAAATAATC AGATTGGAGG GCACCAAGCA
TAA
 
Protein sequence
MMGRTYMAID LKSFYASVEC TECGLDPLNA NLVVADESRT SKTICLAVSP ALKKFGVSGR 
PRLYEVEQRV AYLNNRRAKE MSHQRLSPVV SIYRDELLKS PELKIGYKIA RPRMNFYLEK
SVAIYEIYLR YLPPEKIHVY SIDEVMMDIT DYLNEYHVSA RSLAKEIIQT IKAETQITAT
AGIGTNLFLA KVAMDIVAKR IPGDEDGVRI AQMNEHTFRR YLWAHQPLTD FWRIGPGYAR
RLKKLGLHTM GDIARCSLGK LSDPMNEEVL YREFGKNAEI IIDHAWGYES ATIKDIKNYH
SSDHGVYSGQ VLPRPYNFTE TRLVIQEMVN SLALQLTKQN LVTDQVALRV AYDVSNISED
YQGPLVTDFY GRQAPKPMHG KANLSLPTSS GTELMEAFMK LCDSDLDRRL TARKITVIAN
NLLSPRLARL ANYNEQLDLF TDSTKKHKSR SKVQEKDQKL QRLVLDLQNE YGKNAIIRAA
DLKKGATLLE RNNQIGGHQA