Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1262 |
Symbol | |
ID | 5189059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1310546 |
End bp | 1311283 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640591102 |
Product | ABC transporter related |
Protein accession | YP_001271856 |
Protein GI | 148544486 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000313912 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTAG AGATAAATAA ACTTGTTGGT GGATATTCCC AGATTCCCGT GTTGAAGGAT GTCAGCTTTG ATGTCCAACC AGGTGAATTA GTTGGTTTGA TTGGACTAAA TGGTGCCGGA AAGTCAACAA CGCTAAACCA CGTTATCGGC TTGCTGCGAC CATTTTCGGG CTCAATCAAA ATTAATGGTC TTACTATCCA GGCCAACCCG GAAGAGTATA AAAAGCAGAT CGCCTATGTT CCCGAAACGC CAATTCTTTA TGATGAATTG ACTCTCCGTG AGCATATTGA TTTAACGATT ATGGCGTACG AGTTGGACCA CGGTGAAGCA TGGCAACGGG CAACAAAACT ATTAAAACTT TTTCGGCTGG ATAATAAGCT TGACTGGTTC CCCGCTAACT TTTCTAAGGG GATGAAGCAA AAGGTAATGA TCTGCTGTGC CTTTATGACG AAGGCCAAGC TGTTGATTAT CGATGAACCA TTCTATGGGC TGGACCCCTT GGCAGTGCAT GATTTGCTAG ACCTGATTGA GCAAAAGAAA AAGGAGGGCG TCGCGGTTTT GATGTCGACC CACGTTCTTG ATACGGCGCA ACGGTATTGT GACCGCTTTG TCCTATTGGC AGATGGAAAA GTCCAGGCGC ACGGAACCCT TGATGAATTG CGAGCTGCTG GGGATCATGC TGGCGAATCC TTAGATGAGA TTTACTTGCA TCTTGCAAAG GGTGATCGTG ATGAATAA
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Protein sequence | MALEINKLVG GYSQIPVLKD VSFDVQPGEL VGLIGLNGAG KSTTLNHVIG LLRPFSGSIK INGLTIQANP EEYKKQIAYV PETPILYDEL TLREHIDLTI MAYELDHGEA WQRATKLLKL FRLDNKLDWF PANFSKGMKQ KVMICCAFMT KAKLLIIDEP FYGLDPLAVH DLLDLIEQKK KEGVAVLMST HVLDTAQRYC DRFVLLADGK VQAHGTLDEL RAAGDHAGES LDEIYLHLAK GDRDE
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