Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1179 |
Symbol | |
ID | 5188408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1233699 |
End bp | 1234151 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591018 |
Product | ArgR family transcriptional regulator |
Protein accession | YP_001271773 |
Protein GI | 148544403 |
COG category | [K] Transcription |
COG ID | [COG1438] Arginine repressor |
TIGRFAM ID | [TIGR01529] arginine repressor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000244542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG CAGAACGACA ACAAAAAATT CGGGAAATCA TTACTAATGA GAGCATTGAG CGGCAAGAAG ATCTTGTTGC GCATCTGCGT GAAATGGGAT TGACAGTTAC TCAAGCGACT ATTTCGCGCG ACATTAAAGA AATGCAACTG ATAAAGATTC CTGCTGATAA TGGGGGCTAT CGTTATGGCT TGCCAGCATA TCATCACCAA GGACATGAAA ACCAATTAGC ACAAACCCTT CAAGACAGTT TGGAACAATT AAAACGTAAT GACTGTTTCT TAGCGTTAAC GGTTCATCCC GGGAATGGCC CGGTAGTAGC TACCTTAATT CGCAAAATGG ATTTTCCAAC GGTTTTCACA ACAATTGGTG ATGATGGAAA TGTCCTTGTA GTTTGTATGT CTCCAGAAGC AGCAATTAAA TTAGAAGAAA AGCTTAATGC AATGCTCGAC TAG
|
Protein sequence | MKKAERQQKI REIITNESIE RQEDLVAHLR EMGLTVTQAT ISRDIKEMQL IKIPADNGGY RYGLPAYHHQ GHENQLAQTL QDSLEQLKRN DCFLALTVHP GNGPVVATLI RKMDFPTVFT TIGDDGNVLV VCMSPEAAIK LEEKLNAMLD
|
| |