| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1159 |
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| Symbol | rnc |
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| ID | 5188484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1212403 |
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| End bp | 1213104 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640590998 |
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| Product | ribonuclease III |
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| Protein accession | YP_001271753 |
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| Protein GI | 148544383 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000332232 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGAAG AATTACAAGA CTACCTGGCC AAGGAATTTA ATATTCATTT TGATAATCCT
GCTTTATTAG CAGAAGCTTT TACTCAAGCT TCGTATGTAA ATGAACATCC TAACCAAGGA
TTAAAATATT ACGAACGGAT TGAATTTCTT GGCGATGCTG TGTTGGAACT GATCGTTTCA
GAATATATTT ATAAACGTTT CCCTGAATTG CCACAGGGAA AACTTACCCG CTTAAGAGCG
GCAATGGTAT GTGAGGATAG TTTTTCTAAA TTTGCCAAGG AATGTCACTT TGATCAATAT
ATTCGCTTGG GTCATGGTGA GGAAATGGCT GGCGCAAGAG AACGTCCAGG CTTGCTATGT
GATATTTTTG AATCATTTAT TGGTGCCCTC TATTTAGATC AAGGCCGACC AGCAGTCGAA
AAATTTGTTC AACGAGTTAT CTTTCCTAAA CTTGATATGG GCTGGTTTGA TCATGCTGTT
GATGCCAAGA CTAGTCTCCA AGAATTCCTC CAACGTGACG GTGATATTGC CATTGAATAT
CATTTGGTAG AGGAAAGCGG AACAGAAAAC GACCCTGAAT TTAAAGTAAA TGTTACTGCT
AATGGTGACG TTATCGGTGA AGGAAAGGGC TCATCAAAGA AACATGCTGA AATGCAAGCA
GCACAACAGG CACTTGATAA TATGAGAAAT AAAAATAAAT AG
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| Protein sequence | MIEELQDYLA KEFNIHFDNP ALLAEAFTQA SYVNEHPNQG LKYYERIEFL GDAVLELIVS
EYIYKRFPEL PQGKLTRLRA AMVCEDSFSK FAKECHFDQY IRLGHGEEMA GARERPGLLC
DIFESFIGAL YLDQGRPAVE KFVQRVIFPK LDMGWFDHAV DAKTSLQEFL QRDGDIAIEY
HLVEESGTEN DPEFKVNVTA NGDVIGEGKG SSKKHAEMQA AQQALDNMRN KNK
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