Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1144 |
Symbol | |
ID | 5189239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1198327 |
End bp | 1198764 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590983 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001271738 |
Protein GI | 148544368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000013392 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGATG ACATTTTACG AGAAAAGATA ATAAAGCTAC GAGAAGAACG TGGTTGGAGT CAGGCAGAAC TCGCTCGACG CATAAACATG AATAATACTG CCTTAAACAA AGTTGAAAAG GGAACTCGCA AATTGTCTAG TTCTGAACTC AGTGAGTTGG CTTCTGCTTT TAACGTTACT ACTGATTATC TCCTCGGTCG GACACCTACA CCTCAATTTA CTCGGCGAGA TGAACGTGAC GTACAAAAAA CACTTGAAGA AATGTTCAAC GGTTTAAGCG ATAAAAACGC CCTTTCCTAT ATGAAAAACG GCGACCAAGA AATTGATGAA GAAGATGCTG AACTATTACG GGCTTCTCTT GAAAATGCAA TTCGTATGTC AAAAATTCTT GCAAAAAAGA AATTCACCCC TAAAAAGTAT CGAAAGAACG ATGACTAG
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Protein sequence | MNDDILREKI IKLREERGWS QAELARRINM NNTALNKVEK GTRKLSSSEL SELASAFNVT TDYLLGRTPT PQFTRRDERD VQKTLEEMFN GLSDKNALSY MKNGDQEIDE EDAELLRASL ENAIRMSKIL AKKKFTPKKY RKNDD
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