Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1082 |
Symbol | |
ID | 5188528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1144233 |
End bp | 1144976 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590921 |
Product | cyclase family protein |
Protein accession | YP_001271676 |
Protein GI | 148544306 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAC AATTATCATC AACACAAGAA CTAATCGCTA AACTTAAGCA AAAACACTGG GTAGACCTAA CCCATACTTT TGGCCCAGCT AGTCCGCGAT TTCCATCATT CAAGCCCGCA AAATTTGAAA CAATTTTCAC TCATGCAGAT GGTTTTTTCG TTAAGGAATA TACATTTGCT GGACAATATG GTACACACAT TGATCCGCCA GTTCACTTTT ACAAGGATGA TGATCGCTAT GTCGAGGATC TAGAACTCAA AGATCTTGTT TTACCATTAG TCATCATTGA TTATCATCAA AAGGCAGCAG CCAACCCAGA TGCCAGCCTA ACAGTTGCGG ATATTAAAGA TTGGGAAAAA CAAAATGGAC CAATTCCAGC AGGATCATTT GTTGCTCTTC GTACTGATTG GGGAAAACGC TGGCCATCAC AAGAAAAGTT TGAAAATAAG GATAAAAATG GTCAGAATCA TTATCCCGGA TGGTCACTAG AAGCCTTAAA GTATATTTAT GAGACGCGCC ACGCTACTGC AAATGGGCAT GAGACTTTTG ATACAGACAC AGCAACTAAA CAGCAAAATG GATTAGTTGG TGAATACTAT GTCCTGTCTC ATGGTCACTA CCAGGTTGAA TTATTGGATA ATTTGGACCA GGTACCAACA ACTGGTGCTG TAATTAATAT TTCAGTTGCA AAACCTGAAA AGGCTCCAGG ATTTCCCGTT CGCGCATATG CAATTTTCGA TTAA
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Protein sequence | MAQQLSSTQE LIAKLKQKHW VDLTHTFGPA SPRFPSFKPA KFETIFTHAD GFFVKEYTFA GQYGTHIDPP VHFYKDDDRY VEDLELKDLV LPLVIIDYHQ KAAANPDASL TVADIKDWEK QNGPIPAGSF VALRTDWGKR WPSQEKFENK DKNGQNHYPG WSLEALKYIY ETRHATANGH ETFDTDTATK QQNGLVGEYY VLSHGHYQVE LLDNLDQVPT TGAVINISVA KPEKAPGFPV RAYAIFD
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