Gene Lreu_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1082 
Symbol 
ID5188528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1144233 
End bp1144976 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID640590921 
Productcyclase family protein 
Protein accessionYP_001271676 
Protein GI148544306 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAC AATTATCATC AACACAAGAA CTAATCGCTA AACTTAAGCA AAAACACTGG 
GTAGACCTAA CCCATACTTT TGGCCCAGCT AGTCCGCGAT TTCCATCATT CAAGCCCGCA
AAATTTGAAA CAATTTTCAC TCATGCAGAT GGTTTTTTCG TTAAGGAATA TACATTTGCT
GGACAATATG GTACACACAT TGATCCGCCA GTTCACTTTT ACAAGGATGA TGATCGCTAT
GTCGAGGATC TAGAACTCAA AGATCTTGTT TTACCATTAG TCATCATTGA TTATCATCAA
AAGGCAGCAG CCAACCCAGA TGCCAGCCTA ACAGTTGCGG ATATTAAAGA TTGGGAAAAA
CAAAATGGAC CAATTCCAGC AGGATCATTT GTTGCTCTTC GTACTGATTG GGGAAAACGC
TGGCCATCAC AAGAAAAGTT TGAAAATAAG GATAAAAATG GTCAGAATCA TTATCCCGGA
TGGTCACTAG AAGCCTTAAA GTATATTTAT GAGACGCGCC ACGCTACTGC AAATGGGCAT
GAGACTTTTG ATACAGACAC AGCAACTAAA CAGCAAAATG GATTAGTTGG TGAATACTAT
GTCCTGTCTC ATGGTCACTA CCAGGTTGAA TTATTGGATA ATTTGGACCA GGTACCAACA
ACTGGTGCTG TAATTAATAT TTCAGTTGCA AAACCTGAAA AGGCTCCAGG ATTTCCCGTT
CGCGCATATG CAATTTTCGA TTAA
 
Protein sequence
MAQQLSSTQE LIAKLKQKHW VDLTHTFGPA SPRFPSFKPA KFETIFTHAD GFFVKEYTFA 
GQYGTHIDPP VHFYKDDDRY VEDLELKDLV LPLVIIDYHQ KAAANPDASL TVADIKDWEK
QNGPIPAGSF VALRTDWGKR WPSQEKFENK DKNGQNHYPG WSLEALKYIY ETRHATANGH
ETFDTDTATK QQNGLVGEYY VLSHGHYQVE LLDNLDQVPT TGAVINISVA KPEKAPGFPV
RAYAIFD