Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1042 |
Symbol | mmuM |
ID | 5189060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1103176 |
End bp | 1104108 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640590884 |
Product | homocysteine methyltransferase |
Protein accession | YP_001271639 |
Protein GI | 148544269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000341653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAGA TTACTGCAGA ATTAACTAAA CCATTACTAA TTGACGGCGC AATGTCAACG GCTTTGGAAC AATTAGGTGC TGATACCAAT AACTCATTAT GGACGGCGAG TGTTTTAGCT AACCAGCCAG CATTAGTTAA AAAAGTTCAT CAGGAATATT TTAAGGCGGG TGATCGGTTA GCAATTACTG ATACCTACCA GGCAAATGTT CCGGCATTCA TAAAGAATGG TTATTCAAAA CAAGAGGCCC ATTCATTGAT CCAACGAGCA GTCGTCTTGG CTAAAGAAGC ACGTGATGAA TATCAGCAGG AAACCGGGAT TTATAACTAT GTTGCGGGCG CGCTTGGTCC TTATGGCGCT TATCTTGCTA ACGGGAGTGA ATATAGTGGT GCTTATCACC TCAGTACAAT TGAATATCAA CAATTTCATC GGCCACGATT AACTGATATT TTAACGGTTG GTGTTGATGT GATCGCGATT GAAACCCAGC CACGCTTAGA TGAAGTGTTG GCAGAATTGG ACCTTGTCAA AGAACTAGCT CCCGATACCC TATGCTATGT CAGTTTTTCC TTGAAAGATT CCACGCATTT ACCAGATGGG ACACCGTTAG CAGTGGCGGC TCGAACCGTT GCGAAGTATA CAAATGTTTT TGCAGTTGGC GTGAATTGTA TTCCATTAGA AGAGGTAACG GCAGCCATTG AGACGGTCCA TCAAGTTACT GAGAAACCAG TTATTGCTTA TCCCAATTCG AGTGCGACTT ATGATCCGAC AACAAAAACG TGGAGCTATC CCCATGGGCG TCGCGGTTTA GTTGATTACT TACCACAATG GATCGCGGCT GGATTGATAA TCGTTGGGGG ATGCTGTACT ACTACGCCAC AAGATATTGC TGCCTTGCAT GAGTACTTAA AAGGAGGCGC CTATCATGAC TAA
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Protein sequence | MTKITAELTK PLLIDGAMST ALEQLGADTN NSLWTASVLA NQPALVKKVH QEYFKAGDRL AITDTYQANV PAFIKNGYSK QEAHSLIQRA VVLAKEARDE YQQETGIYNY VAGALGPYGA YLANGSEYSG AYHLSTIEYQ QFHRPRLTDI LTVGVDVIAI ETQPRLDEVL AELDLVKELA PDTLCYVSFS LKDSTHLPDG TPLAVAARTV AKYTNVFAVG VNCIPLEEVT AAIETVHQVT EKPVIAYPNS SATYDPTTKT WSYPHGRRGL VDYLPQWIAA GLIIVGGCCT TTPQDIAALH EYLKGGAYHD
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