Gene Lreu_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1016 
Symbol 
ID5189872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1067263 
End bp1068522 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content41% 
IMG OID640590855 
Productchloride channel, core 
Protein accessionYP_001271613 
Protein GI148544243 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA CGCAAGAGAA CATTTCATTA GCTATTGCAA CGGTTGTTCT TGGAATAGTC 
GTTGGGTTTA GCTCATTGAT CCTTAGCGCT ATTCTAGATT TAACAGAGCA TTATTTTTTA
AATTTTAACG AGACAAATAA GATTCCGGTT AATATTAATA TTTTTCCTAT TCATCGATTT
GTCTCGGTGC TAATAGGGGG GATAATCGCT ACCATTATTT GGTACTTTCT TCAGCGCCAT
TATCATCCAG TTAGCATTAA AAATGCCCTA AATGGTAAAG AGATGCCGTT AAGAAAAACA
TTTATTCACG TAGTTACCCA GATCTTTTTT GTAGGGACTG GGAACTCGAT CGGTCGTGAA
TTAGCCCCAC GAGAAGCAGG GGCGGCTATC GCTCAGAAAT GGTCCCGAGT GCTTGATTCT
TATCGATGGT TGCACATCAA TGATGAAGAT AAACGTTTAT TAATCGCCGC TGCTGCTGGA
GCTGGCTTCG CGGGGGTCTA TATTGCACCT ATTACAGGAA CTGTTTTCTG TTTAGAAATT
TTATACCGGC GCATTAATAC TCGTTCAGTT TCCGTTAGCT TAATCATGTC AGTAATTGCA
ACGATGATTG GTTCAATTTT AAAAGGATTC GAACCATATT ATATTGTCGG AAGCCGTGAT
TTCTCTTTGC TATCCGTTCC ATTAGCAATT GTATTAGGCT TAATCCTTGG AGTAACCGGA
ACCTGGTTTA AACAAGGAGT TAAAGCAGCT TCTAGTAAAC GGGCAACGGG TAAAAATATT
TTCTGGCAAT TACCACTTTT ATCATTCTCA GCAGGAGCAA TTGCAGCCTT TTATCCGCAG
ATTATGGGGA ACGGGCGGGG ACTTGCTCAA TTAGCTATGA ATACGACCAC TGTCAATTCC
CAGGTCCTAG GAGCGCTCTT GTTTGGCCTC GTTGCTAAAG TAGTGGTTAC CCTATTTACA
ATCAAATGTG GGGGCTATGG AGGAACACTG ACGCCATCGA TTGCCGCTGG AGCAGTTATT
GGAGTATTTC TCGGTATTCC TTATATGCAC TTTTTCCCGA TTGTGACTTT AACGCAGTGT
GCAGTTATCG GGGCCTCATT ATTTTTAGCA GCATCACAAC AAGCACCGTT AATGGCATTA
TTTATGTTAT TTGAAGTTTG TCACCTTAAC TTTACAGCTT TTCTTCCCCT GGGGATTGGA
GTCGCAATTT CAATTGGAAT TTCAAAATGG ATGCAGGAAG CAAAAGCAAG GACAAAATAA
 
Protein sequence
MKETQENISL AIATVVLGIV VGFSSLILSA ILDLTEHYFL NFNETNKIPV NINIFPIHRF 
VSVLIGGIIA TIIWYFLQRH YHPVSIKNAL NGKEMPLRKT FIHVVTQIFF VGTGNSIGRE
LAPREAGAAI AQKWSRVLDS YRWLHINDED KRLLIAAAAG AGFAGVYIAP ITGTVFCLEI
LYRRINTRSV SVSLIMSVIA TMIGSILKGF EPYYIVGSRD FSLLSVPLAI VLGLILGVTG
TWFKQGVKAA SSKRATGKNI FWQLPLLSFS AGAIAAFYPQ IMGNGRGLAQ LAMNTTTVNS
QVLGALLFGL VAKVVVTLFT IKCGGYGGTL TPSIAAGAVI GVFLGIPYMH FFPIVTLTQC
AVIGASLFLA ASQQAPLMAL FMLFEVCHLN FTAFLPLGIG VAISIGISKW MQEAKARTK