Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0992 |
Symbol | |
ID | 5188662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1045860 |
End bp | 1046306 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640590831 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001271590 |
Protein GI | 148544220 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0028906 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAG ATAATGATTA CGAAAAAATC AATAAAGGAT TAATCAAAGT CTATTCCGGA ATTCTATGGA TTGAAGAAAA TGAGTTACGG AAAAGTACAT TCAATGATTT AACAATTAAA GAGATGCATG CAATTGATGC AATTACGATG TATAACCATC AAACAATTTC TCAAGTAGCA GAAAAGCTTC ATCTAACTCC AGGAACAATG ACCTCAATGG CTGATCGTTT AATTCGAAAA GGATATGTTG AAAGAATTCG TGATAAAGAT GATCGCCGCA TTGTTCGGTT ACGTTTAACC AAAAGAGGAC GGGTACTATA TCGTGCACAT CGGGCCTTTC ATAACATGAT GGTTGAACGT TTTCTCAAAG GAATGAATGA TGAAGAAATG AAGGTTGTTA AAAAAGCCTT GCAAAACTTA GAAGATTTTG TGGATGAGCA TGCCTAG
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Protein sequence | MSKDNDYEKI NKGLIKVYSG ILWIEENELR KSTFNDLTIK EMHAIDAITM YNHQTISQVA EKLHLTPGTM TSMADRLIRK GYVERIRDKD DRRIVRLRLT KRGRVLYRAH RAFHNMMVER FLKGMNDEEM KVVKKALQNL EDFVDEHA
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