Gene Lreu_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0957 
Symbol 
ID5188524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1014757 
End bp1016007 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content37% 
IMG OID640590788 
Producthypothetical protein 
Protein accessionYP_001271556 
Protein GI148544186 
COG category[S] Function unknown 
COG ID[COG3410] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.62553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TAGACAACGC TGCAACTAAC AAAATTTCAC CATTTAAAAA ATTAACGACA 
GAGCAAGAAC AACTCGTCAA TGACATTATT TCATTTACTA AACACCATCT AACACAAAAT
CATCCTGCGA TATATACAGT CTACGGGGAT GCAGGTACCG GAAAAAGCGT AATCTTATCA
CAATTATTCG TTCGCATTCA AAAAGAAGCG CGGACACAAC AAAATTCCGT TCTTTATCAT
ACTAATAATT ATTTTCTTGT TAACCATCCA GAAATTCTGA AAGTCTATAA AGAGATTGCC
GGACCAATAA AAGAGTTATA TAAAAAGGAC TTTGCGCGGC CAACCTCATT AATTAATCAA
TTGGATAAGC AACAGCAAAC CATTGATGTT GCTGTTATCG ATGAAGCTCA TCTTTTATTA
TCCAAACCCG ATCATTATAA TAATTTTTAC CATGATAATC AGCTTGTCGA GATCATTAAA
CGCGCTAAAG TTGTCATAAT TGTCTTTGAT CAATACCAAG TTTTACGGAT GAAAAGTCTC
TGGACCCCTG AACGACTTCA GGCAATTACG AACCAATATC CCCATAAAGA TTACCATTTG
ACCCACATGT TTCGCATGAA TGCGAGCGAT GACTTAGTTA AGTGGTTTAA TGAATTTACT
AACTATAAAT TAACCGCGTT ACCAGCATCC GCCCGTGATC ATTATGATTT TCGCATTTAC
AGTGATGCTG AGGAAATGAG GAAAGCAATT GTTCAACGTA ATAAAGAAGT AGGACTTTCC
CGCATTCTTT CAACATCTGG ATATCCATCA ACACTCGATG GTGGTAAACA CTACATTGAG
GAAGGCAGAT TTAAAATGCC CTGGGATCAA TATAACTATA CAGTTACCCC TTGGGCAGAA
TTGCCTCAAA CCATTGATGA AGTTGGCTCA ATCTATACCT GCCAAGGGTT TGACTTAAAT
TACACCGGCA TTATTATCGG TCCGCCAATT AGCCAAACGC CTCAAACAAA CCAACTTCAA
GTAAATTTAG ATCGTTATAC AGATGTTGAA GCATTCAAAA AACGTGCTGA CCTAACTGAT
CCAGCTGAAA TTAAGAGTTT AGAAAAAAGA ATGATTATGA ATTCTTTGAA CGTTTTATTC
AAGCGTGGTG TATATGGAAC TTATCTTTAC GCTCATGATC CGCTTTTACG ACATTCTCTT
ACCTCCCTTT TTAAAAAGGC TGGGTTTACG CTACCAAAGG AGGAAAAATA A
 
Protein sequence
MKNIDNAATN KISPFKKLTT EQEQLVNDII SFTKHHLTQN HPAIYTVYGD AGTGKSVILS 
QLFVRIQKEA RTQQNSVLYH TNNYFLVNHP EILKVYKEIA GPIKELYKKD FARPTSLINQ
LDKQQQTIDV AVIDEAHLLL SKPDHYNNFY HDNQLVEIIK RAKVVIIVFD QYQVLRMKSL
WTPERLQAIT NQYPHKDYHL THMFRMNASD DLVKWFNEFT NYKLTALPAS ARDHYDFRIY
SDAEEMRKAI VQRNKEVGLS RILSTSGYPS TLDGGKHYIE EGRFKMPWDQ YNYTVTPWAE
LPQTIDEVGS IYTCQGFDLN YTGIIIGPPI SQTPQTNQLQ VNLDRYTDVE AFKKRADLTD
PAEIKSLEKR MIMNSLNVLF KRGVYGTYLY AHDPLLRHSL TSLFKKAGFT LPKEEK