Gene Lreu_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0945 
Symbol 
ID5188454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1003126 
End bp1003461 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content38% 
IMG OID640590776 
Producthypothetical protein 
Protein accessionYP_001271544 
Protein GI148544174 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0114637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCTA AGAATGAACA TGAAGTAAAA AATGACCTTT TTGGTTTCGG TGATAAGAAT 
GTTGCGTTTG CAAAATACTT TATTGGAACA AGTTATCTCA ATGGGTTAGT ATCTCCTGAT
GATAACATTG ATGTAAATAT TTCAAACGTT AATTTTGAGC CCGGTTGCCG TAACAACTGG
CATATTCACC ATGATGGTTT CCAAATCTTA TTAGTAACTG CAGGTGAAGG TTGGTACCAA
GAAGAAGGTA AGCCAGCGCA ATTGTTAAAA CCCGGTGATG TTGTAGCAAT TCATGAAGGT
GTAAAGCACT GGCATGGAGC TACTAAGGAT AGTTGA
 
Protein sequence
MMAKNEHEVK NDLFGFGDKN VAFAKYFIGT SYLNGLVSPD DNIDVNISNV NFEPGCRNNW 
HIHHDGFQIL LVTAGEGWYQ EEGKPAQLLK PGDVVAIHEG VKHWHGATKD S