| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0913 |
|---|
| Symbol | |
|---|
| ID | 5189572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 968981 |
|---|
| End bp | 970108 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640590744 |
|---|
| Product | phosphomevalonate kinase |
|---|
| Protein accession | YP_001271512 |
|---|
| Protein GI | 148544142 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1577] Mevalonate kinase |
|---|
| TIGRFAM ID | [TIGR01220] phosphomevalonate kinase, ERG8-type, Gram-positive branch |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000929735 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTACTG AAAAAGCTCC CGGTAAATTA TATATTGCCG GTGAATATGC TGTTGTTGAA
AATGGTTATC CTGCAATTTT AGTTGCATTG GATCAGTTTG TTACCTGTAC GATTGAGGAA
AGCGTGCAAG AAGTTGGCCA AATTATTAGT CGCCAGTATA ATAACGATCA ACTATCTTGG
CGACGTTTAG GAGACCAAAT GGTAGTTGAT AAGCGTGACA ATCCTTTTTC TTACATTCTT
TCTGCTATTA GGGTTACAGA AGAATATGCT CGTACTTTTA GTCGCGACTT ACGAATATTT
AATATCCATA TTGACAGTCA ATTAGACAGT GCTAATGGTC GAAAATATGG CCTTGGTTCC
TCTGCGGCTG TTACTGTAGC AACTGTTAAG GCCCTTTGTC GGTTCTATAA TTTGCCCGTT
AACAAAGATC AAATCTTTAA ATTAGCTGCA ATTGCCCATT TTGAAGTTCA AGGAAATGGT
TCGTTGGGGG ATGTTGCCGC TTCTGTATAC GGTGGTTGGA TTTCCTACCA TTCATTTGAT
CGGCAGTGGC TTGCCCAACA ACGTAAGTAC CTTGACCTAA AGACAATCAT TGACTTACCT
TGGCCTGATC TTAATATTGA GTCTCTAACC GCTCCTAAAA ACTTAGAGCT TTTAATTGGC
TGGACTGGTA AACCAGCATC AACTTCCCAA CTTGTTGATA AAATTTCTCT TTTTAAAGCC
CGTCGCCAAA CCGAATATCA TCATTTTCTT GAAAAAAGTA AATCGTGTAT CCAACGAATG
GTTGATGGTT TTCATCGTCA AGATCTTGAA GCAATTAAAA ATGAAATCCG TTATAACCGT
GACCTCTTAA AACAACTGGG CACTAATTCA GGGGTAAACA TCGAAACCGA ATCATTATCT
AAGCTTTGCC AAATCGCTGA ATCTTTTGGT GGCGCCGCTA AGACATCTGG TGCCGGTGGC
GGTGATTGTG GGATCGTCGC TATTGATAGC AACTCTAACT TTGGGAATGT CTTAAAGAGT
TGGGCCAAAA ATCATATCGA ACAACTTCCT TTATCCGTAC ACTTTATCGA TAACGCAAAA
AGTTTCAAGA AATCTGTTAA GCACCATCTT TCTTACATTC ACAAGTAG
|
|---|
| Protein sequence | MITEKAPGKL YIAGEYAVVE NGYPAILVAL DQFVTCTIEE SVQEVGQIIS RQYNNDQLSW
RRLGDQMVVD KRDNPFSYIL SAIRVTEEYA RTFSRDLRIF NIHIDSQLDS ANGRKYGLGS
SAAVTVATVK ALCRFYNLPV NKDQIFKLAA IAHFEVQGNG SLGDVAASVY GGWISYHSFD
RQWLAQQRKY LDLKTIIDLP WPDLNIESLT APKNLELLIG WTGKPASTSQ LVDKISLFKA
RRQTEYHHFL EKSKSCIQRM VDGFHRQDLE AIKNEIRYNR DLLKQLGTNS GVNIETESLS
KLCQIAESFG GAAKTSGAGG GDCGIVAIDS NSNFGNVLKS WAKNHIEQLP LSVHFIDNAK
SFKKSVKHHL SYIHK
|
|---|
| |