| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0897 |
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| Symbol | |
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| ID | 5189377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 952334 |
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| End bp | 953224 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640590729 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001271497 |
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| Protein GI | 148544127 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000354473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA AACGCTTTGT TTATCAACGA AAGAGACTTG GCTATTCACA AGTTGCCTTA
AGCAAGGGGA TTTGTACCCA GTCGACCTTA AGTAAGTTTG AAAGCAATGG TCAAGTACCA
TCACTCACGA TTCTGGCGCA GCTTTGTGAT CGGCTAGGGC TAACGATTGA TGATTTAAGT
AAGGACAATA CATCCTCAAT TCGTTATATG AGAAGCCTGC TTGACCAGAT TGAATTGGCT
TTAATGATTG AACACTTTCC TCAGGCAGTT AGTAACCTTA AGAAGATTCG GCTTGAAGAT
TTAAAATCTC CACAAGATCG GATGCAATAT TATTATTTAA AAGGGATGAT TTATACTTTA
ACTAATAATA ACGCGTCGAC AAGTCTCTTT AACTTTACTA AGATTTTAGA TGAACTGGAT
GAGCAACATC GGACGATCTT TTCACCATTA GCATATTTAG GATCAGGGAT CTTATATGCG
CGGCAAAATT CAATGGAACA TGCTGATTTC TTTTTCTCAA AGGTTATTTC ATTTTTAAGA
TCAAAGGCTG ATGAAGACTT AGCAGGTGTT GATCGGAATT ATTATCTACG GATTGTAACA
ATGATGTACT ACGCTGCCGA GTACCATTCA TTAAATAAGC GGTTAGAGGT TAGTAACCAA
GTTTTGGAGG CTACGACAAA GATCTGTGCT AGCAATCACG TTACTTATTT CTTACCACGT
ATCAAATTAC TAGAAGCAAA TAATGCAATT GAGTTAGGAG AAAGCTCGAA AAAAATACGC
CGGCTTTTAA CTGAAGCAGA GGTATTTGCT CGCTTCAATA AAAACAATGT TGTTGAAGTT
CAAGTAGCTG CCCTGTTAAA TAACTTTGAT AAGACGATTA GTAATAAATG A
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| Protein sequence | MDIKRFVYQR KRLGYSQVAL SKGICTQSTL SKFESNGQVP SLTILAQLCD RLGLTIDDLS
KDNTSSIRYM RSLLDQIELA LMIEHFPQAV SNLKKIRLED LKSPQDRMQY YYLKGMIYTL
TNNNASTSLF NFTKILDELD EQHRTIFSPL AYLGSGILYA RQNSMEHADF FFSKVISFLR
SKADEDLAGV DRNYYLRIVT MMYYAAEYHS LNKRLEVSNQ VLEATTKICA SNHVTYFLPR
IKLLEANNAI ELGESSKKIR RLLTEAEVFA RFNKNNVVEV QVAALLNNFD KTISNK
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