7 homologs were found in PanDaTox collection
for query gene Lreu_0897 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_0897  helix-turn-helix domain-containing protein  100 
 
 
296 aa  608  1e-173  Lactobacillus reuteri DSM 20016  Bacteria  decreased coverage  0.0000000354473  n/a   
 
 
-
 
NC_009513  Lreu_0478  helix-turn-helix domain-containing protein  30.06 
 
 
281 aa  94.4  2e-18  Lactobacillus reuteri DSM 20016  Bacteria  decreased coverage  0.000000000308908  n/a   
 
 
-
 
NC_008531  LEUM_2039  XRE family transcriptional regulator  50 
 
 
280 aa  75.1  0.000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0793  XRE family transcriptional regulator  24.39 
 
 
282 aa  66.2  0.0000000006  Oenococcus oeni PSU-1  Bacteria  normal  0.313892  n/a   
 
 
-
 
NC_013205  Aaci_1747  transcriptional regulator, XRE family  30.12 
 
 
436 aa  44.7  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2884  transcriptional regulator, XRE family  46.67 
 
 
292 aa  43.1  0.005  Bacillus cereus G9842  Bacteria  normal  normal  0.308835 
 
 
-
 
NC_011725  BCB4264_A2452  transcriptional regulator, XRE family  46.67 
 
 
292 aa  43.1  0.006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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