| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0885 |
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| Symbol | |
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| ID | 5189726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 940542 |
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| End bp | 941117 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640590717 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001271485 |
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| Protein GI | 148544115 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTTCA ATGAAGAAGA TGAAGAAAAG TACCTTAAGT TGATTAACAA TACCCGTCGC
GGAAGCAATA AGGACTTCGA AGAGTTATTT CGCCGTTATT GGCCGCTCGT TCGCCGACTG
TGGCAACGAT ATAATATTAG CGGCCTTGAA TTGGCAGATT GGGAACAGGA AGCCCGTGTT
GTGATGCTAG AAGTTATTCG TTTATACAAT AATCAAGGTC CGCGCATGTT TAGCTGCTTT
TTTAAGGAAT GCTTAACCAA CCGGATTCGT GATATTCAAC GACAAACTCA GGCTCACAAA
CGGATCCCAG CAGGCTGTCT TTACGCATTA AGCGATGATT TTGCTGAAAC ACTTACCGAC
TTTTTACATC ATTCCCCTGA TGACATTATT TATTGCCGGC AGAGTCTTGA CCGTTTACTT
TGCCACTGTT CTACATTTGA ACGAAAAGTA CTAGTGTATC TCCATACTGG TTATTCGATA
ACTGAGATTG CTGGTACCCT TGATTGCTCT AAACGGAGCG TCCAAAGTGC CTTGCATCGT
TGCCACGGCA AGCTATTAAA AGTATTAATG AAGTAA
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| Protein sequence | MRFNEEDEEK YLKLINNTRR GSNKDFEELF RRYWPLVRRL WQRYNISGLE LADWEQEARV
VMLEVIRLYN NQGPRMFSCF FKECLTNRIR DIQRQTQAHK RIPAGCLYAL SDDFAETLTD
FLHHSPDDII YCRQSLDRLL CHCSTFERKV LVYLHTGYSI TEIAGTLDCS KRSVQSALHR
CHGKLLKVLM K
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