Gene Lreu_0866 details

Gene Information

• Locus tag: Lreu_0866
• ID: 5190053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 916309
• End bp: 918222
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640590698
• Product: cell wall anchor domain-containing protein
• Protein accession: YP_001271466
• Protein GI: 148544096
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
• TIGRFAM ID: [TIGR01167] LPXTG-motif cell wall anchor domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.373011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGC ATTGGAAATT GCGTTTTACT CTCTCCTTAT TAGTTCCTTT AGGGTTCAAT 
TTATTTTATT CTTTACCAAC TCATGCGTCT GAAACTAACA TTCAAACTAA TGTTAAAGTT 
GATGCTCAAA GTTCAAAAAC GATTACGAGC ACTGAAAATC AATCAGCTCT TGTAACTGCA 
CAACAAGTTA AAGATCAACA AATCGATAGT CAACAGTTAG TTAATGATAC ATATCAAAAA 
ATAGCGGAAA ATAAGGATCT TAATAGTGTG ATTTATCAGG ATCCAGTAAA TGCACGGCAA 
CAGGTAAATG CTTTGCCAGA TACAAACACT ACTTCAGAGC AGCCTTTTTA CGGAGTGCCA 
ATTCTAATTA AAGGGTTAGG CCAAGCATAT AAAGGATATC CGAATACGAA TGGACTTCCG 
TATATGGAAG ATAATCGTTA TGGTTATACT AAAAATTTTG TGGCAAAGTT GCAGAAAATG 
GGATTTGTAA TTGTTGGTGA AACAAATTAT CCTGAGTTAG GATTAATTAA TGTTACAGAT 
TCCAATTTAT ATGGGCCAGC GCATAATCCA TGGGACCTCA CGCGAAATGC TGGCGGATCT 
TCTGGTGGAG CGGCGGCAAG TGTGGCTGCT GGAATAGTAC CGCTTGCAAC CGGAAATGAT 
GCTGGTGGTT CCTTAAGAAT TCCTGCTTCG TGGTCAGGTG TAATTGGGTT AAAACCTACT 
CAGGGAATTA TTCTTGGAGA TTCATTAACG CCTTCAGTGG TTAACTTTGC AGAAACGCGG 
CGGATTGATG ACACGATCAA GTTATTTGAG GGCTTACTAG ATCCAAACCG GAAATCATTA 
TTGAAGGAAT TTCCGCTTAA GCTCCAAGAC CTAAAAATTG CATATTCATT AAAATCACCA 
GTAGGTTCTG TTGTTAGTGT GGACGCTAAA GCAGCTGTTT TAAATGCAGT AACCTTCTTA 
CGGCAACAGG GCTTTCAAGT AGTCGAAAAG GATAGTCCGG TTGATGGGGT AAAACTGATG 
CGTGCTTATT ATTTAGGGGC TTTGAGTGAC GGAACAGTTG CTAATTATCT GGCTCAACAA 
AAACTGCACC GTAATCTGCA GGCTAGCGAC GTCACAGAGC ATTTGGTTAG TCCGATGACA 
TATGCGTTGT ATGAAGCTAG TAAAAAAGCA CCCAAAGAAA TAAAGCAAAC TTACAATAAT 
GAATTAGCGT TAGTTGCTGC TCAGATGAAG AGTTTTCATG AAGAATATCC GATTTATTTA 
ACGCCAACTA CCGCAACGGT TGCACCATTA AATTCTGATC CAGCATTTTT ACCAGCAGAT 
GTTGCTAAAA TTTTGCAAAT GGCCAAGATG CCTTTTGATC AACAAATGGA TGTTATTTAC 
AATGCTTGGT ATCATGGATT AAGTAAAACG CCATTTACGC AATTAGCTAA TTTAGCAGGA 
GAACCGGCGT TAAGTTTGCC GACTTATGTT AACGCACAAG GATTGCCATT AGGGATTCAG 
TTAGAAGGAG AAAAAGGCAG TGACCTGATT TTATTAGCGT TAGGGAAATT ATTTGAAGAG 
AAAGGTAAAC TAATCTTCCT AAGTGATTAC CAAAAGTTAA ACAATGATAC CCAGCCTAGT 
GAGCCACAAA ATGAAGACGC AGCAAATATC TCAAAAGTTG TTGTCCACAA TTTAGGCAAA 
AAATCAGTTT ATGAATTCCA AACTGCCTCA AGTAAACTTA ATATTTCAGA TAATATTAGT 
CCGAAATATG TAGTAAAAAC TTCGCAACAA GTGAATGCTA GGAAATTACA ATCGACAAAA 
GAAAAGCAGT TACCACAAAC AGGATCAAAT AATAATGATG GGTTAGTTTT GCTTGGATTA 
GCTTTATTCT CATTAAGTCT GACAAGTGTT TATCAAAACA AGCGAAAATT TTGA 

 

Protein sequence

MKKHWKLRFT LSLLVPLGFN LFYSLPTHAS ETNIQTNVKV DAQSSKTITS TENQSALVTA 
QQVKDQQIDS QQLVNDTYQK IAENKDLNSV IYQDPVNARQ QVNALPDTNT TSEQPFYGVP 
ILIKGLGQAY KGYPNTNGLP YMEDNRYGYT KNFVAKLQKM GFVIVGETNY PELGLINVTD 
SNLYGPAHNP WDLTRNAGGS SGGAAASVAA GIVPLATGND AGGSLRIPAS WSGVIGLKPT 
QGIILGDSLT PSVVNFAETR RIDDTIKLFE GLLDPNRKSL LKEFPLKLQD LKIAYSLKSP 
VGSVVSVDAK AAVLNAVTFL RQQGFQVVEK DSPVDGVKLM RAYYLGALSD GTVANYLAQQ 
KLHRNLQASD VTEHLVSPMT YALYEASKKA PKEIKQTYNN ELALVAAQMK SFHEEYPIYL 
TPTTATVAPL NSDPAFLPAD VAKILQMAKM PFDQQMDVIY NAWYHGLSKT PFTQLANLAG 
EPALSLPTYV NAQGLPLGIQ LEGEKGSDLI LLALGKLFEE KGKLIFLSDY QKLNNDTQPS 
EPQNEDAANI SKVVVHNLGK KSVYEFQTAS SKLNISDNIS PKYVVKTSQQ VNARKLQSTK 
EKQLPQTGSN NNDGLVLLGL ALFSLSLTSV YQNKRKF