Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0753 |
Symbol | |
ID | 5188159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 826886 |
End bp | 827779 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590586 |
Product | tyrosine recombinase XerD subunit |
Protein accession | YP_001271354 |
Protein GI | 148543984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000038176 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACG AAGTGGCTGC GTTTTTAGCT TTTTTAAAAG ATGAACGACA ATTAAGCGAT AATACCTTGA TGAGTTATCA ACGTGACTTA GAACAAACTG TGACTTATTT AGAAGATCGA GGGATTGTCG ATTGGCAACA GGTGGACCAC TATTTACTAA TTGACCTTCT TAATAGTCTT CGTCAGCAGG GGAAAGCTAA TTCAACAATT AACCGTGTGA TTTCAAGTTT ACGGCAATTT TATAAATACA TGATCCGTCA CCATAACCTA ACCATTAATC CAATGGAAAT GATTGATCAC CAGTATACCT TTAACCAACC ACCTGCACCG GTAATTTTAA CTGAAAAAGA AATTGAACAA CTGCTGGCAG TCCCGGATGT TTCAACCCCA ATTGGCCTTC GTGATCGAGC GTTGTTAGAG ATTATGGATG CAACGGGAAT GAGGGTTAGT GAAGTAATTG CTTTGGATCT GACAGCACTT CATCTCGACG TTAAGCTTCT ACAACTAACG GGAAAGAATG AACGTGAACG AATGATTCCC TTAAGTCAAC CAGCAGTTAA GTGGCTTACC GACTACCTAG ACCGCGGTCG ACCACGTTTA CTCAGAGATG AGCACGAAAC GCGGGTGTTC TTAAATGCTC ATGGTTATCC TTTGACGCGG CAAGGAATTT GGAAAAAAAT GAAGGAATGG GTTAGTGAGG CTAAAATTAA AAAAGAAGTT ACTCCTCAAA CCATGCGCTA TTCTTTTGCT GTTCATTTAA TAGAAAATGG CGCCGACGTC CAATTAATCC AAGAAATCCT TGGTTATAAC GCGATGAAGG CTCTCCAACC ATATTTACAG GTTTCGCCGC AACAGTTATC TGCTAACTAT ATGAAATATC ATCCGCGTGC ATAG
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Protein sequence | MNNEVAAFLA FLKDERQLSD NTLMSYQRDL EQTVTYLEDR GIVDWQQVDH YLLIDLLNSL RQQGKANSTI NRVISSLRQF YKYMIRHHNL TINPMEMIDH QYTFNQPPAP VILTEKEIEQ LLAVPDVSTP IGLRDRALLE IMDATGMRVS EVIALDLTAL HLDVKLLQLT GKNERERMIP LSQPAVKWLT DYLDRGRPRL LRDEHETRVF LNAHGYPLTR QGIWKKMKEW VSEAKIKKEV TPQTMRYSFA VHLIENGADV QLIQEILGYN AMKALQPYLQ VSPQQLSANY MKYHPRA
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