| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0657 |
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| Symbol | uvrC |
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| ID | 5189028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 724948 |
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| End bp | 726759 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640590490 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001271259 |
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| Protein GI | 148543889 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000040695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTG AACATTTAGA ACATAAACTA GCATTGTTAC CTGACAAGCC AGGTTGCTAC
CTGATGAAAA ACATTAATGA TCAGATAATT TATGTTGGTA AAGCTAAAAA TTTGAAGAAT
CGGGTTCGCT CTTACTTTAA GAGTAGTCAC ACCGGTAAAG TAGCTAAAAT GGTTTCGGAA
GTTGCAGACT TTGAAACCAT TGTAACTTCG ACTAATAAAG AGTCGTTCTT ACTCGAAATA
ACGCTGATTC AAAAACATCA ACCTTATTTC AATATCAAAT TAAAAAAGGG AACTGGTTAT
CCCTACATAA AAATAACAAA TGAGCGAGAT CCTCAAATTA AGATCGTTAG TAAAATAAAA
AAAGATGGTG GATATTATTT TGGCCCTTAT CCAAATGTCT ATGCTGCGGA GGAAACGATG
CATTTTATTC AAAAGGTTTA CCCATTAAGA CGATGTAATG GGTACCAAGG CCGTCCGTGT
TTGTATTACC ATATGGGACA ATGTTTAGGA GCTTGTTTTA AAGAAGTTCC TAAGAGTGAC
TACGAAGAGC AAATTAAGAA AATTAAGTCA TTTTTGAGTG GAAACACAGC GACAGTTAAG
CGACAGTTAA CCAAAAAGAT GCAACGAGCA GCAGAAAATA TGGAGTTTGA ACGAGCGGCT
GAAATTCGAG ACCAGCTTCA CTATATTGAA GTAACGGTTG AAAAACAAAA GATTATTTCA
AATGATAAGA CCCCTCGTGA TTTGTTTAAT TTCTATATGG ATAAAGGGTG GCTTTCTATT
CAAATTTTCT TTATCCGACA AGCACGGTTA ATGAAACGAG AAAAACGTCT ATTTCCAATC
GTGGATACGG CAGTCGAAGA AATGACCAGC TTTATTCTTC AATTTTATAA TCGTCGTAAT
AATATTTTGC CGCATGAAAT TCTCCTTCCC AAGGGTCTCC CTAATAAAGA AATAAGTGAA
ATACTAGGGG TGCCGGTTCG GACACCTGTT CGGGGAGAAA AACGAGATCT CTTAGCAATG
GCACATGAAA ATGCTCAGTT GTCCTTAGAT GAAAAATTTC GACTGCTTGA GATGGACCAA
AGTAAGACTA CCGGTGCGAT GAAAGAGATT ACGGATGCCC TTGGACTTCC AGAAGGTCAC
CGGATTGAAG CATTTGATCA TTCTCATATT CAGGGGGCTG ACCCCGTCAG TGCAATGGTT
GTATTTATTA ATGGAGAACC GGCTAAAAAT TTTTACCGGA AGTATAAATT GAAAACGGTG
ATTAATCATG CTGACGAAGC TGCCAGTACC CGTGAAGTTA TTCGGCGGAG GTATTCGCGT
CTCTTAAAAG AGAATAAGCC AATGCCGGAT ATGATTTTTA TGGATGGTGG CGAAATTCAG
ATGGATGCGG CTAAAGATGT TTTAGAGAAT GAACTTGGTC TCGAGATTCC GGTAGTAGGG
ATGGTAAAGA ATGATAAACA CCAAACCGCT GACTTATTGT TCGGGGATGA TGATCACCAT
ATTAATTTGA ATCCACGGAG CCAAGGCTTT TACTTAGTTC AACGCATTCA AGATGAGGTT
CACCGGTTTG CGATTACTTT CCACCGGCGC GTTCATACTA AGCATTCGTT GAGCTCGCGT
TTGGATGAAA TTAAGGGAGT GGGACCCCGA ACTCGAACAA AATTGCTTAA AAAATATGGA
TCAATTACCA AAATTGCTCA AGCCTCAGTT GATGAAATCC ATTCACTAGG AATTAATCGA
CCTACCGCCC AGTTAATCAA GGTTTCATTG CAGAAAAATG CTGAGGTGGC GAAGGGTAGT
AGTCATGATT GA
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| Protein sequence | MASEHLEHKL ALLPDKPGCY LMKNINDQII YVGKAKNLKN RVRSYFKSSH TGKVAKMVSE
VADFETIVTS TNKESFLLEI TLIQKHQPYF NIKLKKGTGY PYIKITNERD PQIKIVSKIK
KDGGYYFGPY PNVYAAEETM HFIQKVYPLR RCNGYQGRPC LYYHMGQCLG ACFKEVPKSD
YEEQIKKIKS FLSGNTATVK RQLTKKMQRA AENMEFERAA EIRDQLHYIE VTVEKQKIIS
NDKTPRDLFN FYMDKGWLSI QIFFIRQARL MKREKRLFPI VDTAVEEMTS FILQFYNRRN
NILPHEILLP KGLPNKEISE ILGVPVRTPV RGEKRDLLAM AHENAQLSLD EKFRLLEMDQ
SKTTGAMKEI TDALGLPEGH RIEAFDHSHI QGADPVSAMV VFINGEPAKN FYRKYKLKTV
INHADEAAST REVIRRRYSR LLKENKPMPD MIFMDGGEIQ MDAAKDVLEN ELGLEIPVVG
MVKNDKHQTA DLLFGDDDHH INLNPRSQGF YLVQRIQDEV HRFAITFHRR VHTKHSLSSR
LDEIKGVGPR TRTKLLKKYG SITKIAQASV DEIHSLGINR PTAQLIKVSL QKNAEVAKGS
SHD
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