Gene Lreu_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0516 
Symbol 
ID5188738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp575900 
End bp576550 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content38% 
IMG OID640590323 
ProductABC transporter related 
Protein accessionYP_001271121 
Protein GI148543751 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAG TTCGAGATTT AAAAAAGAGT TTTGGCGATC GGCAAATTTT AGATGGGGTT 
AATTTAACAG TTAAAGATGG TGAAATTCTT TGTATTGTTG GTCCATCAGG TGCTGGGAAA 
ACGACCTTAC TTCGTTGTAT TACTGGACTG GAAACTCCTG ATAGTGGTGA GTTTTTCATT 
AACGGTCGTC GATTTGACCC TCAGGGAACA GATGCAGCTG ACCGAGTAAT CGGTGTGGTT 
TTTCAAGACT TTAAGCTTTT CCCAAATCTT TCGGTAATGG AAAATATTAC GTTAGCGCCG 
ATGATGGTAT TGAAAAAGGA TAAACAAGAA GCAATTGCTG AAGCACAAAA ACTGCTTGAA 
GAATTAGGCC TTAATACAAA AGGAAAATTG TACCCCTACC AACTTTCAGG TGGACAAAAG 
CAACGGGTTG CCATTGCTCG TGCATTAGCA ATGAAGCCTA AAATTTTGTG CTATGATGAA 
CCGACATCAG CGCTTGATCC AAACCTCCGA AAAGATGTGG CTAATATTAT TTTAGGATTA 
AAGAAGGATG GAATGACTCA GTTAATTGTT ACTCACGATT TAGAATTTGC GGAAGATATT 
GCTGATGATA TTTTACGAGT ACAACCACTT GATCAACGTC AGAATAAATA A
 
Protein sequence
MLEVRDLKKS FGDRQILDGV NLTVKDGEIL CIVGPSGAGK TTLLRCITGL ETPDSGEFFI 
NGRRFDPQGT DAADRVIGVV FQDFKLFPNL SVMENITLAP MMVLKKDKQE AIAEAQKLLE 
ELGLNTKGKL YPYQLSGGQK QRVAIARALA MKPKILCYDE PTSALDPNLR KDVANIILGL 
KKDGMTQLIV THDLEFAEDI ADDILRVQPL DQRQNK