Gene Lreu_0468 details

Gene Information

• Locus tag: Lreu_0468
• Symbol: atpC
• ID: 5188554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 523032
• End bp: 523463
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640590275
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001271073
• Protein GI: 148543703
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.3605
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA ATACTTTTAA GGTCACTATT ATTACTCCAG ATGGCACCGT CTATGATAAT 
GATAAGGTTA CCATGCTCGT TATGAACACT GCTGGTGGAC AAATGGGAAT CATGGCTAAC 
CACGTACCAT TAATTGCTGC ACTTGAAATC AGTACAGTTC GAATTAAACA TTCTGAAGGC 
ACTGATGAAG TTGCAGCGGT TAACGGTGGG ATTATTCAAT TTGATGGTCA AAATGCTACA 
ATCGCAGCTG ATAGTGCTGA AATGCCTGAA GCAATTGACG TTGAGCGGGC ACAGAGAGCT 
AAAAAGCGTT CTGAGTCTGC AATCGCAGAA GCAAAGAAGA AGCATAACCA AAGCGACTTA 
TCACGTGCAG AAGTTCACCT CAAGCGTGCA ATTAACCGTT TGAATGCTGC TTCTAAGCAA 
CGCAATATCT AA 

 

Protein sequence

MAENTFKVTI ITPDGTVYDN DKVTMLVMNT AGGQMGIMAN HVPLIAALEI STVRIKHSEG 
TDEVAAVNGG IIQFDGQNAT IAADSAEMPE AIDVERAQRA KKRSESAIAE AKKKHNQSDL 
SRAEVHLKRA INRLNAASKQ RNI