Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0417 |
Symbol | |
ID | 5189535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 470461 |
End bp | 471948 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640590223 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001271023 |
Protein GI | 148543653 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000648211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TGTATCGGTT GATGCTTTCA TTTTTTGCGA TTATTTTGAC GCTAATGGTG ATTGTTAGTA TTTCGTTTAT CAATGTGACT AACAACACTA TGTATCACAA TACGTGGCAA CAATTGAAAA GTTATTCTGA TAGTTTAATT CAGGATTCTA TTCGTTACAA TATGGCAACC CAAAGTTTTG AAGGGTTTGC TACAGAATCA TTAAATAGCA ATGCCAATCT TTTAACACGT CAAAATGTCC ACTTTGCGAT TTACGATACA ACTCACCGGA AAATCTTTGC CAGTAATGGA TTTGCTCCTA GTATGAGTAA AAGTGATTGG AAAAAATTAA AAAAAGGAGA AACCGTTTGT ACTAAGCTAA TTACTCCTAA AATTAATTCA CGAGTATCGA AGGGTGCTTC TCCACGAATG ACCGAAGTTT CACGACCATA TTTCTATAAG GGGAAGATGA TTGCGGTAGT ATCAATTGCA ACCTTTGTAT CGACGATTGA GCAAAATATG CATCAAATAA AGATTAACTT AATAATGGCA TTACTGACTG CTAGTCTTGT AACGCTTGCA GTTAGCTACT TCTTGGCACG GTCAATTACC AAACGAATTG ATCGATTGCG GATGGCTACT CACCAAATTG CGCAAGGAAA TTACAATGTT GAAGTGGACG ATAATGGGCG TGATGAAGTG GCAGACCTTG GTCGGAGTTT TAACCAAATG ACCGCTTCGT TACGTGAATC GCAACAAGAA ATTCGCCGGC AAGAGGAGCG GAGACGCCAA TTTATGGCTA ATGCAGCCCA TGAAATGCGG ACGCCATTAA CAACCATTAA TGGAATTCTT GAAGGATTAC AGTATGATGC GATTCCAGAA GAGGATAAAA AGCATAGTAT CCAGTTAATG CAAAATGATA CGCGGCGTTT AATTCGCTTG GTCAATGATA ATTTGGATTA TGAAAAGATT CGCACTAACC AAATTGCGAT GGAACGGAAA GTATTTGATG CATCGGCAGT ACTCGAAAAT TTACGAGAGC AGTTAGCGAA AAAGGCAAAA GAGAAAAAGG ATACTCTGCA CTTGGATGTA GAAAAGAATT TACGGGTATA TGCAGACTAT GATCGGTTTG TACAGATTAT GTTCAATATC ATTCAAAACG CAATCCAATT CACTGATAAC GGAATTATTG ACATTCGAGG AAAACGTGTG GAAAAGGGAA GTCAATTTGA AGTTCAAGAT AATGGAATTG GGATGACTCC TGAACAACTT GAAAATATCT GGGAACGATA CTATAAAGCT GATCGTTCAC GGATGAATAC TAAGTACGGA GAATCTGGCT TAGGACTCGC AATTGTGCGG CAGTTAGTTC TTCTTCATGG CGGAAAAATT GACGTAAAAA GTCAGTATGG TAAGGGGACG ACATTTACAA TCTTTTTCCC TGATCGTGAA TACGCTCCGC ATAATATTCA ACCTACAAAT AATAAAGACA AAAAGTAA
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Protein sequence | MKLMYRLMLS FFAIILTLMV IVSISFINVT NNTMYHNTWQ QLKSYSDSLI QDSIRYNMAT QSFEGFATES LNSNANLLTR QNVHFAIYDT THRKIFASNG FAPSMSKSDW KKLKKGETVC TKLITPKINS RVSKGASPRM TEVSRPYFYK GKMIAVVSIA TFVSTIEQNM HQIKINLIMA LLTASLVTLA VSYFLARSIT KRIDRLRMAT HQIAQGNYNV EVDDNGRDEV ADLGRSFNQM TASLRESQQE IRRQEERRRQ FMANAAHEMR TPLTTINGIL EGLQYDAIPE EDKKHSIQLM QNDTRRLIRL VNDNLDYEKI RTNQIAMERK VFDASAVLEN LREQLAKKAK EKKDTLHLDV EKNLRVYADY DRFVQIMFNI IQNAIQFTDN GIIDIRGKRV EKGSQFEVQD NGIGMTPEQL ENIWERYYKA DRSRMNTKYG ESGLGLAIVR QLVLLHGGKI DVKSQYGKGT TFTIFFPDRE YAPHNIQPTN NKDKK
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