| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0402 |
|---|
| Symbol | |
|---|
| ID | 5189561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 454519 |
|---|
| End bp | 455058 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590207 |
|---|
| Product | exonuclease, RNase T and DNA polymerase III |
|---|
| Protein accession | YP_001271008 |
|---|
| Protein GI | 148543638 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000167602 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATT TTATAGCAAT GGACTTTGAG ACTGCTAATG GCAAGCGTTA CAGTGCATGT
TCACTTGCAC TCACAATCGT TCGGAATGGA CAAATTGCCG ACGAATTTTA CACCCTAATT
AATCCTCATA CTAAATTCTT TTGGCGTAAT ACTCAGATCC ACGGTATTCA TGAGCGTGAC
GTCCAAAATG CGCCTGATTT TCCAGAAGTA TGGGAACATA TCAACCAATT CTACACTCCT
GATAAACTGG TTATTGCCCA TAATAATCGG TTTGATAATA GCGTTTTAAG AAATACGTTA
GAGCATTACA ATATCGAAGT CCCCGCCTAC CAGACACTCG ATACTGTTGC TTCAAGCCGC
CAGTTGATTC CAGGACTAAC AAATTATAAA CTTAATACTG TTTGCGACGC GTTAAATATT
GACCTTCATC ACCACCATAA TGCTCTTGAT GATGCCCAGG CTTGCGCTAA CATTCTGCTT
TATCAAAGTA AGCATTTTAC CCCGCAACAA ATTCAGCCCT TTATTAATTT AATCGGCTAA
|
|---|
| Protein sequence | MMNFIAMDFE TANGKRYSAC SLALTIVRNG QIADEFYTLI NPHTKFFWRN TQIHGIHERD
VQNAPDFPEV WEHINQFYTP DKLVIAHNNR FDNSVLRNTL EHYNIEVPAY QTLDTVASSR
QLIPGLTNYK LNTVCDALNI DLHHHHNALD DAQACANILL YQSKHFTPQQ IQPFINLIG
|
|---|
| |