Gene Lreu_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0208 
Symbol 
ID5188814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp243483 
End bp244181 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID640590004 
ProductNAD-dependent deacetylase 
Protein accessionYP_001270815 
Protein GI148543445 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCGA CGATTCAAAA AACATTTGAC GACGCAAAAA ATATTGTCTT TCTAACGGGA 
GCTGGTGTTT CGACTGCTTC TGGCATTCCT GATTTTAGGT CAGCAAACGG TTTATATACG 
CAGAATCGGA ATGCGGAATA CTATTTAAGT CACCGGTATT TTGCTAGTGA TCCAGAAGGC 
TTTTACGAAT TTTGCAAGCA AAATTTGTAT TTTCCAGATG CAAAGCCCAA CGTAATTCAT 
CAAAAACAGG CAGCCTTGAC GCAACAGGAC CGTGCGACTG TTATAACGCA AAATATCGAT 
AACTTATATG AAGAAGCTGG CACGAAACAC TTGATTGACT TTCATGGGAA CCTTTTCCAC 
GTTTATTGTG AAAAGTGTCA TGAAACTGTT CCAGTGAGCG AATATTTGAA GAGTCGCCTG 
CATCAAAAGG ATAATGGTCC CTTGCGTCCG GACATTGTGT TATATGATGA AGGAATTAAG 
CAAGAGGATA TTATCAATTC TGTCAAGGCA ATGCAACAAG CTGATTTAGT TGTGATTGTG 
GGTACCTCGA TGAAAGTATA CCCATTTGCG GGCTTGCTAG ATTACCGTAA TCCAAATGCA 
AAGGTGATTG CTGTTAATCA GCAGTTATTG CATTTTCCTT TTGACTTTCA AATGGTTCAA 
GACGATGCAA CAAAATTCTT TGACGAATTA AAAGTATAA
 
Protein sequence
MDATIQKTFD DAKNIVFLTG AGVSTASGIP DFRSANGLYT QNRNAEYYLS HRYFASDPEG 
FYEFCKQNLY FPDAKPNVIH QKQAALTQQD RATVITQNID NLYEEAGTKH LIDFHGNLFH 
VYCEKCHETV PVSEYLKSRL HQKDNGPLRP DIVLYDEGIK QEDIINSVKA MQQADLVVIV 
GTSMKVYPFA GLLDYRNPNA KVIAVNQQLL HFPFDFQMVQ DDATKFFDEL KV