Gene Lreu_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0154 
Symbol 
ID5190003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp187695 
End bp188411 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content45% 
IMG OID640589950 
ProductNUDIX hydrolase 
Protein accessionYP_001270763 
Protein GI148543393 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGACA AAATTGTTGC ACGACCGCTA ATTACGATTG CAAATATTAT CTGGAGCTTT 
AATCCGCAAA CGCACTTGCC CCAAATCCTG CTTGTAAAAC GGGCATATGC ACCTTTTAAG 
GATCGGTGGG CACTCCCGGA AACTCTATTA CGGAGCAATG AAAGCGCCAA AATTGCTTGC 
ATTCGTTTGA TTAAGGATAA AATTGGGGTT CAGCTTTCCA ATAGTGCGAC CGAACAATTA 
GCAACATTTA CTAATCCCCA GCGGGTTAGT GGCGACCGCG CGTTGGCGAT TGCTTACATG 
ACATTTTTAC CAGTGATGCC CCAGCTTAAA GCCGGATACG GGGCGACAGA AGTGCGGTGG 
TTTAGTCTCA ATTTTGACCA TGGTGACTTC CTGCTGCAAA ACGGCGAACT TGTCTTGGGG 
TTATCCGACG ATTCACCGTT AGCATTTGAC CATCACCAAA TTATTGGGAC TGCAATTAGG 
CGCATTAAAA ATAAATTAAA CTATCAGCCG ACGATTCTCC AGATCCTGGG GCCAACCTTT 
ACTTTACGCC AGGCACGAGA AGTCTATGCG ATCTTTTTAC AAACAACGGT CGAGAAAATT 
GATAATTCTA ACTTTAAGAA AACCCATCGA AAAATATTTA AGGAGGTTGG AACGGCTGCT 
ACTAAGCGTT CGGGACGGCC GCCTAAGCTA TTTAAACTGG CGGAGGGTTG TATTTAA
 
Protein sequence
MVDKIVARPL ITIANIIWSF NPQTHLPQIL LVKRAYAPFK DRWALPETLL RSNESAKIAC 
IRLIKDKIGV QLSNSATEQL ATFTNPQRVS GDRALAIAYM TFLPVMPQLK AGYGATEVRW 
FSLNFDHGDF LLQNGELVLG LSDDSPLAFD HHQIIGTAIR RIKNKLNYQP TILQILGPTF 
TLRQAREVYA IFLQTTVEKI DNSNFKKTHR KIFKEVGTAA TKRSGRPPKL FKLAEGCI