Gene Lreu_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0022 
Symbol 
ID5190059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp24897 
End bp25739 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content36% 
IMG OID640589818 
Producthypothetical protein 
Protein accessionYP_001270635 
Protein GI148543265 
COG category[S] Function unknown 
COG ID[COG4853] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA AACGTATTCA ATGGATCTTT ATCCTTGCCT TTTTGCTTTT TGATATTTTT 
GTTGGAAGTT CATTAATCTT AGAAACTAGA TTTACCGTTT CTAATGGTCA GCAAAATCGC
CAATCAACAG TGTTAAAAGA AATGCGTAAT GACTCGATTA GTTATGGCGA GCTTTCTAAT
AAGCAGCAAA CCGGATATTA TATTGCTGGA AAGAAATCTT CTGATGGCGG AGACCTAGAG
CAGGAAACCG GAAAATTACG TAATCAAAAC TTTCGCCTTT CTTCAGGAAC ATTGACTAGT
GAGTTTGATA AGCCAATTAA AATCACTGAA AGTAATAATA TTCGGCGTGT CGACCGTCTA
TTAAAAAATA AAAAGATGGT AAGCTTAGGA AATCATTATC GCTATAACAA GGAATTATCG
GACAAAAATA CCCTTGTTTA TACGCAAATG CTAGAAGGAA AGCCGCTATT TTCAAATGAT
GGGCAAATTC GTTTTCGGCT AAACTCTGAC CATGAGATAA CAGGTTATAC GCAGACTTAC
TTGCAAGATG TTGAAATTCT CCGGCAACGG TCAAATACGA TTAGCCAGCG CCGAGCAATT
ACCTGGTTGT ATAAACATAA TCAGATTCCT AATAACTCCC GCATTAGGTG GTCGGTGCTC
AGTTATTCTA AGCTCCTTAA CACTACTACT GATGATAAAG CAGTCTATGT GCCAACGTGG
ACTGTTGAAA TCAAAACTAA AAACTCAGGA GCAATTCAAC AATTACAAGT TAACGCATTT
AATAGTACAG TTATGAAGGA AACGCCAGAT AGTGTGAATA CGAACTCGTT AAATAATAAG
TAA
 
Protein sequence
MNFKRIQWIF ILAFLLFDIF VGSSLILETR FTVSNGQQNR QSTVLKEMRN DSISYGELSN 
KQQTGYYIAG KKSSDGGDLE QETGKLRNQN FRLSSGTLTS EFDKPIKITE SNNIRRVDRL
LKNKKMVSLG NHYRYNKELS DKNTLVYTQM LEGKPLFSND GQIRFRLNSD HEITGYTQTY
LQDVEILRQR SNTISQRRAI TWLYKHNQIP NNSRIRWSVL SYSKLLNTTT DDKAVYVPTW
TVEIKTKNSG AIQQLQVNAF NSTVMKETPD SVNTNSLNNK