Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0009 |
Symbol | rpsR |
ID | 5188535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 10249 |
End bp | 10485 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640589803 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001270622 |
Protein GI | 148543252 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000183869 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACAAC AACGTCGGGG CGGACGTCGT CGTCGTAAGG TCGACTTCAT CGCCGCAAAC CACATCGAAT ACATCGATTA CAAAGACACT GATTTATTAC GTCGGTTCAT TTCTGAACGT GGTAAGATCT TACCACGTCG GGTTACTGGT ACTAGTGCTA AGAACCAACG TAAGTTAACT ATCGCTATCA AGCGTGCACG GATCATGGGT CTTTTGCCAT TCGTTGCAGA AGACTAG
|
Protein sequence | MAQQRRGGRR RRKVDFIAAN HIEYIDYKDT DLLRRFISER GKILPRRVTG TSAKNQRKLT IAIKRARIMG LLPFVAED
|
| |