Gene Pput_5213 details

Gene Information

• Locus tag: Pput_5213
• ID: 5193680
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 5855884
• End bp: 5856615
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640589696
• Product: hypothetical protein
• Protein accession: YP_001270515
• Protein GI: 148550413

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.551419
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCAAG CACTGCCCTT CGCGCTGGCA GCCCTGCTAC TGGGCGGCTG CACCAGCCAC 
AAACCCGAAG ATTTCAACGG CATCTGGATC AACCAGGAAG CCATCACTGC GGCGGTCAAA 
GCCGGCAGCC TGCGCCAGGC GCTGAATGAG CACGGCCCAG TGTTCGAGTG GAAGCTCGAC 
GTGGCCAATC AGCAAGCTAG CTATAGCAAT GGTTTCGAGG CCGCTGACGG CCAGCTGAGC 
GCCAATGAAA AGCAATGGCA GGCCCGTTTC CAAGGCGGCC AGACCGAGCA GCTTTCGCTC 
GATGGCGACG AGCTGCTGGC CGTCGACCAG AACGGCACCA AGCAAACCTT CGTGCGCGCC 
AAGACACCGG CGGCAGCCAA TGCACCACTG GGCAGCAGCT TCGAGAAGGC GCTTTACCAG 
GCCTACCTGG GTGGTGACTG GAAGATCGTC GACGGCCAAG GCAAAGGTGC CAGTGTACGC 
TTCAGCGATA CCGGCAACGT CACCGGCCTA CCGGGGCCGG ACCGCTTCGC CCTGTGCCTG 
GCAGGTGATT GCGCGACCAT GGGTGGCAAC AATGACAGCC TGTGGCTGGA GCGCAACCAG 
CGTGGCGCAC CGTTCATCAT CAAGCGCGAT GGTGACAAGC TGGAGATTTT CCAGGCAGTG 
AACCGTGCCC AGCCGGATGA AATGCCAGAG CTGGCAGCGG GCAAGCGTCA ATGGGCGCTG 
GAGCGCAGCT GA 

 

Protein sequence

MRQALPFALA ALLLGGCTSH KPEDFNGIWI NQEAITAAVK AGSLRQALNE HGPVFEWKLD 
VANQQASYSN GFEAADGQLS ANEKQWQARF QGGQTEQLSL DGDELLAVDQ NGTKQTFVRA 
KTPAAANAPL GSSFEKALYQ AYLGGDWKIV DGQGKGASVR FSDTGNVTGL PGPDRFALCL 
AGDCATMGGN NDSLWLERNQ RGAPFIIKRD GDKLEIFQAV NRAQPDEMPE LAAGKRQWAL 
ERS