| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5097 |
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| Symbol | |
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| ID | 5190616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5728291 |
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| End bp | 5729964 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589580 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001270399 |
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| Protein GI | 148550297 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC CCGACAACCT GGCACTCGAC CTCAAGCGCG TGCTCCAGGC CCTGCTCGCT
GACCAGCACC TGCACGCCAG CGATACCCTG CAAGTACTCG AACACGCCGC CGCCCACCCC
GGTAGCCACC CGCTGGAACA CATCGCCGCC AGCAGCCTGG AAAGCCGCCA GCACCCTGGC
CAGCCTCTGG ACCTGGAATA CCTTTGCCAA TGGCTGGCCG ACAAGGTCGG CCAACCCTAC
CTGCGCATCG ACCCCATGCA ACTCGACCTG CCCCAGGTCA CCGGCCTGAT CTCCCCAGCC
TTCGCCCAGC GCCACGGCAT CCTCATCGTC GCGGCCGATG CCTCCAGCGT CACCGTCGCC
AGCGCCCAGC CTTTCCAGGA TGACTGGCAG GCCGACCTGG CCCGCAGCCT CGGCCGATCG
ATCCGTCGCG TACTGGCCAG CCCGCAGCAG ATCCGTGAGT CAGCGCAGTC GTTCCACCGC
CTGGCCCAGT CGGTAAAAGG CGCGCAATAC CAGCAGTCGG CCAGCCTGGG GGAACTTGAG
CAATTGCTGG AGCTGGGCAA ACGCCAGGCC GAGGCCAGCG CAGACGACGC ACACATTGTG
CATATCGTCG ACTGGCTGCT GCAGTACGCC ATTGAGCAAC GCGCCAGCGA TATCCACTTG
GAACCGCGCC GCGAACAGGG CCAGCTGCGC TACCGCATCG ATGGCCTGCT GCACACCGTC
TATGCCTTCC CCGCCGGTGT CACCCTGGCC CTCGTCAGCC GCCTGAAACA CCTGGGCCGC
ATGGACGTTG CCGAGAAACG CCGGCCGCAG GACGGCCGGT TGCAAAGCCG CCTGCCCGGT
GGTGGCGAAG TGGAGCTGCG GCTTTCGACC CTGCCCACCC CGTTTGGCGA GAAACTGGTG
CTGCGCCTGT TCGACCCGCA CCAGTTGCAA GAGGGCTTCG ACCGCCTTGG CCTGCACGGC
CAGCAACTGG CCCAATGGCA GCGCCTGCTA CGTCAGCGCC AAGGCATCAT CCTGGTCACC
GGCCCCACCG GCTCCGGCAA AACCAGCACG CTGTACACCA GCCTCAAACT GCTGGCCACC
CCACAGGTCA ACCTGTGCAC CATCGAAGAC CCGATCGAGC GCCTGGAGCC TGCCTTCAAC
CAGCTGCAGG TGCAGCCCGC GCTGGACCTG GGGTTTGCCA ACGCGGTCAG GGCTATGCTG
CGCCAAGATC CCGACATCAT CATGATCGGC GAAATTCGCG ACCGCGAAAC CGCCCTGGTG
GCAGTTCAGG CAGCGCTGAC CGGGCACCTG GTACTGTCCA CCCTGCATAC CAACGACGCT
TGTGCAGCAA TTACCCGCTT GCAAGAGCTG GGTGTGGCCG ACTACCTCAT CAAGGCGACG
CTTATCGGGG TGATGGCCCA GCGCCTGGTG CGAACCGTCT GCACCGACTG CCAGGCAGGT
TCATCAGCCA CCTGCCGAGC CTGCCGCGGC ACCGGTTTTC AGGGGCGCAC AGGATTATTC
GAACTGCTCG AGCCCAGCGA CACCTTGCGC GCATTGATCG GCCCTCATGC CGACCTGACC
CGATTGCGGC AACAGGCACT GGCCGATGGC CTGGTTGACC TGCGCCATTG CGGCGAGGCC
AAAGTGGCCG CTGGGCAGAC CCGTGCCGAG GAAGTGCTGC GCGTCTGCAA CTGA
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| Protein sequence | MHTPDNLALD LKRVLQALLA DQHLHASDTL QVLEHAAAHP GSHPLEHIAA SSLESRQHPG
QPLDLEYLCQ WLADKVGQPY LRIDPMQLDL PQVTGLISPA FAQRHGILIV AADASSVTVA
SAQPFQDDWQ ADLARSLGRS IRRVLASPQQ IRESAQSFHR LAQSVKGAQY QQSASLGELE
QLLELGKRQA EASADDAHIV HIVDWLLQYA IEQRASDIHL EPRREQGQLR YRIDGLLHTV
YAFPAGVTLA LVSRLKHLGR MDVAEKRRPQ DGRLQSRLPG GGEVELRLST LPTPFGEKLV
LRLFDPHQLQ EGFDRLGLHG QQLAQWQRLL RQRQGIILVT GPTGSGKTST LYTSLKLLAT
PQVNLCTIED PIERLEPAFN QLQVQPALDL GFANAVRAML RQDPDIIMIG EIRDRETALV
AVQAALTGHL VLSTLHTNDA CAAITRLQEL GVADYLIKAT LIGVMAQRLV RTVCTDCQAG
SSATCRACRG TGFQGRTGLF ELLEPSDTLR ALIGPHADLT RLRQQALADG LVDLRHCGEA
KVAAGQTRAE EVLRVCN
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