Gene Pput_5095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5095 
Symbol 
ID5192989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5727204 
End bp5727674 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID640589578 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001270397 
Protein GI148550295 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCG AGCTGGACGC CTACGACCGT CGCATCCTCG AACTGCTGCA GGAGGACGCT 
TCGCTGTCCA GTGCACAGAT CGCCGAGCGC GTCGGGCTGT CGCAATCGCC GTGCTGGCGG
CGCATTCAGC GGTTGAAGGA AGAGGGGGTG ATTCGTGGGC AGGTGACCTT GCTGGACCGC
AAGAAGGTCG GCCTGAACAC GCAGATTTTC GCCGAAGTGA AACTGAACGC CCACGGGCGC
TCCAACTTCA CCGAGTTCAC CGAGGCGATC CGCGGGTTCC CTGAGGTGCT GGAGTGTTAT
GTACTGATGG GGGCTGTGGA CTTTCTGCTG CGAATCGTCA CGTCGGACAT CGAGGCCTAC
GAGCGGTTCT TCTTCGAAAA ACTGTCGAAC GTGCCGGGGA TTCAGGAGGT GAATTCGATT
GTGGCGCTTT CCGAGATCAA GTCCACCACT AGCCTGCCGC TATCGCGTTG A
 
Protein sequence
MHSELDAYDR RILELLQEDA SLSSAQIAER VGLSQSPCWR RIQRLKEEGV IRGQVTLLDR 
KKVGLNTQIF AEVKLNAHGR SNFTEFTEAI RGFPEVLECY VLMGAVDFLL RIVTSDIEAY
ERFFFEKLSN VPGIQEVNSI VALSEIKSTT SLPLSR