| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5043 |
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| Symbol | |
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| ID | 5192446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5668350 |
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| End bp | 5669183 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640589526 |
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| Product | thymidylate synthase |
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| Protein accession | YP_001270345 |
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| Protein GI | 148550243 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.182015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCT ATCTGGATCT ACTGACAGAT GTTTTGGAGA ACGGGTCGGT CAAAGGTGAC
CGAACTGGGA CTGGTACTAT TAGTGTTTTT GGGCGTCAGT ATCGACATGA CCTGTCGAAA
GGCTTCCCGC TTCTTACTAC CAAGAAGTTG CACTTCAAAA GTATTGTTAA TGAGTTGATT
TGGTTCCTCA GTGGGGATAC CAATATCAAA TGGCTCAATG AAAATGGCGT CAAGATTTGG
AATGAGTGGG CTACCGAAGA AGGTGACCTG GGCCCTGTTT ATGGTAAGCA GTGGACTGCT
TGGCCAACCA AAGATGGCGG CACGATCAAT CAGATCGACT ACGTCGTAAA TGCCCTGAAG
ACCAATCCGA ACAGTCGCCG TATCTTGTTC CACGGCTGGA ACGTTGAGTA CCTGCCCGAC
GAGAAGGTGA GTCCGCAGGA GAATGCTGAG AACGGCAAGA TGGCCCTTCC CCCGTGCCAC
CTGCTCTATC AGTTCTACGT TGTCGACAAC AAGCTGTCAG CGCACCTGTT CATTCGCTCG
TCTGATAGCT TCCTCGGGCT GCCCTATAAC ACGGCCTCAC TTGCATGCCT GACCCACATG
CTGGCTCAGC AGTGCGATAT GGGCGTTGGT GAAATTGTGA TCTCGCTGAG TGACGTCCAC
ATCTACTCCA ATCATATGGA GCAGGTGAAA ACCCAGATTT CTCGCGAGCC CCGCAAGTTG
CCTGAGTTGA AGCTGCTGCG TAAGCCGGAA TCGATCTACG ATTACAAATT CGAGGACTTC
GAATTGGTCG GTTACGATCC GCATCCACAC ATCGCTGCGC CTGTATCTAT CTGA
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| Protein sequence | MKSYLDLLTD VLENGSVKGD RTGTGTISVF GRQYRHDLSK GFPLLTTKKL HFKSIVNELI
WFLSGDTNIK WLNENGVKIW NEWATEEGDL GPVYGKQWTA WPTKDGGTIN QIDYVVNALK
TNPNSRRILF HGWNVEYLPD EKVSPQENAE NGKMALPPCH LLYQFYVVDN KLSAHLFIRS
SDSFLGLPYN TASLACLTHM LAQQCDMGVG EIVISLSDVH IYSNHMEQVK TQISREPRKL
PELKLLRKPE SIYDYKFEDF ELVGYDPHPH IAAPVSI
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