| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4954 |
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| Symbol | |
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| ID | 5191996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5573221 |
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| End bp | 5574222 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589439 |
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| Product | hypothetical protein |
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| Protein accession | YP_001270258 |
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| Protein GI | 148550156 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTT GGCTGGCAGT GGTCGAGGGC TCAGGCCGCT TCCGACGGCT GGCGCCAGTG
CTGGTGGCTG TTGTGTTGTT CAGCCTGGGC TGCGCGATGC GCCTGCCCGC CCTGTTGCAG
CAGCAGGCGC GGGAGGATGC CAGGCATGTC GAGTTGAGCC AGCTGCAGGT AGCCAGTGCA
TCGCAGTTGG CCGAACTGGA GCGGCTGAAG GCTCTAACGG TGATTGCCGA ACAGCGGTTG
CAAGCGGCGC ACTGGTACCT GGCGGCCGGG GAGAGCATGA GCGACCTGCT TGAGCGTCTG
GCAGTGTCGG GGCATGCACA CGGCTTGCTT GTCGAGCGAC TCGATGTAGG TGAGGGCGAG
CAACAGGCCG GATTCAGTAA GGTACCGCTG GTGGTGCAAG TGGTAGGGCG TTACTCGGCC
TTGCGGCTGT GGCTGGGCGA CTGGTTAGGG CAGGCACGGA TTCTGCGCAG CGGTGACATG
AGCCTGGCAA CCGTTGATCG CCAGCCTGGA CTGTTGCGCC TGCAGTTGCG GGTTGATGCC
TATCACGCGG CTACGCCCCT GAAGGCACCT GCAATGCTGG CGGACCTGCC GGCAAGGGCC
GCAATGGCTG CACCTGAAGT GGACCCGTTT GCGCCGGCTG CTGCGCGAGT GGCCAGTGCC
GGGCTGGTCG GCGTGCCGTT GGCGCAGCTG GAAATGGTCG GCAGCCTGGC GCGCGGGGCG
GCACGCGAGG CACTGCTGAA GGCGGCTGGC AAGCTCTATC GCGTACGCCC GGGCGACCGG
GTAGGGCGTG ATCAGGGGGT AGTGATGCAT ATAGACCAAC GTCAGGTCGA AGTGCGTGAG
CGGCTGTTCA TGGCGGGGGT GTGGCACGAG CGCACGGCGT TCATCACCCT CGCCAAGCGC
CAGGGCAAGG AGGCCTCGGA CCCGAATGAA AACGTGGATG AAATACCTGC TGGCAACCCT
GCTGTCGATC CCGCTGGCTT CGGCGACGCC TTACCAGGGT GA
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| Protein sequence | MLAWLAVVEG SGRFRRLAPV LVAVVLFSLG CAMRLPALLQ QQAREDARHV ELSQLQVASA
SQLAELERLK ALTVIAEQRL QAAHWYLAAG ESMSDLLERL AVSGHAHGLL VERLDVGEGE
QQAGFSKVPL VVQVVGRYSA LRLWLGDWLG QARILRSGDM SLATVDRQPG LLRLQLRVDA
YHAATPLKAP AMLADLPARA AMAAPEVDPF APAAARVASA GLVGVPLAQL EMVGSLARGA
AREALLKAAG KLYRVRPGDR VGRDQGVVMH IDQRQVEVRE RLFMAGVWHE RTAFITLAKR
QGKEASDPNE NVDEIPAGNP AVDPAGFGDA LPG
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