| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4898 |
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| Symbol | |
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| ID | 5194624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5494546 |
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| End bp | 5495346 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640589383 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001270202 |
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| Protein GI | 148550100 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.733781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA AATACCTTTC GCGACTGCTG GTCGGTGTGA CCGCCCTGGT CGCCGTGACC
GCGGCCCAGG CGGGCGCCAT CGATGACGCG GTCAAGCGCG GCACCTTGCG GGTGGGCATG
GACCCAACCT ACATGCCGTT CCAGATGACC AACAAACGTG GCGAGATCAT CGGCTTCGAA
GTCGATATCC TCAAAGCCAT GGCCAAGTCC ATGGGCGTGA AGTTTGAGGC AGTGTCCACC
GCCTATGACG GCATCATCCC GGCCTTGCTG ACCGACAAGT TCGACATGAT CGGCAGCGGC
ATGACCCTGA CCCAGGAGCG CAACCTGCGC CTGAACTTCA GCGAACCCTT CATCGTGGTT
GGCCAGACCC TGCTGATCCG CAAGGAGCTG GCTGGCGAGA TCAAGTCGTA CAAGGACCTG
AACAACGAGA AGTACCGCCT GACGTCCAAG CTTGGCACCA CCGGCGAAAT GGTGTCCAAG
AAGCTGATCA GCAAAGCCAA GTACCACGGT TACGACAACG AGCAGGAAGC GGTGATGGAC
GTGGTCAATG GCAAGGCCGA CGCCTTTGTC TATGACGCGC CGTACAACGT GGTGGCGGTA
GAGAAAGCCG GCGCCGGCAA GCTGCTGTTC CTCGAAGAAC CCTTCACCTA CGAGCCGCTG
GCCTTCGGCC TGAAGAAAGG CGACTACGAC AGCATCAACT TCATCAACAA CTTCCTGCAC
CAGATCAAGC ACGACGGGAC CTACGATCGT ATTCACGATA AGTGGTTCAA GAACAAGGAC
TGGCTGAAGG AAATGGAATA A
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| Protein sequence | MIKKYLSRLL VGVTALVAVT AAQAGAIDDA VKRGTLRVGM DPTYMPFQMT NKRGEIIGFE
VDILKAMAKS MGVKFEAVST AYDGIIPALL TDKFDMIGSG MTLTQERNLR LNFSEPFIVV
GQTLLIRKEL AGEIKSYKDL NNEKYRLTSK LGTTGEMVSK KLISKAKYHG YDNEQEAVMD
VVNGKADAFV YDAPYNVVAV EKAGAGKLLF LEEPFTYEPL AFGLKKGDYD SINFINNFLH
QIKHDGTYDR IHDKWFKNKD WLKEME
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