| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4628 |
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| Symbol | |
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| ID | 5195420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5192093 |
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| End bp | 5193436 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589111 |
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| Product | d-galactonate transporter |
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| Protein accession | YP_001269932 |
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| Protein GI | 148549830 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.563971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000103132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGCA AATCCGCCGT TGCCGCACCG CAGGCCGTGG CCGGGATCGG TCGCCATCGC
TTCCTGGTGC TGGCGCTGAT CTTCGTCATT ACCGTCATCA ACTACGCCGA CCGCGCCACC
TTGTCGATCA CCGGCACCGA GGTGCTCAAG GACCTGGGGC TCGATCCGGT CATGCTGGGC
ATGATCTTTT CTGCCTTCGC CTGGGCCTAC ACCCTCGGCC AAGTGCCGGG GGGCTGGCTG
CTCGACCGCT TCGGTGCCCG CCGCGTGTAC GGTATCAGCC TGATCCTCTG GTCGCTGTTT
ACCTTGCTGC AAGGCACTGT GGGCTGGATG GGGCTGGCCG GCGTCTCGGC AGCGGTGGCA
CTTTTTTCAA TGCGCTTCAT GCTTGGGCTG GTGGAGTCGC CGGCCTTCCC GGCCAACTCG
CGCATCGTCA GCTGTTGGTT CCCGACCCAG GAGCGTGGCA CTGCATCGGC ACTGTTCAAT
TCGGCGCAGT ACATGGCGGT GGTGGTGTTC GCCCCCTTGA TGGCATGGAT GACCCATGCA
ATGAGCTGGG AGCAGGTGTT CATCTGGATG GGGCTTCTGG GCTTGCTGCT GAGCCTGTTC
TGGTTCCGCT TGTACCATGA GCCCCACAGC GCACCTGGGT TGAGCCGTGA AGAGCTGGAA
TACATGCGCG AAGGTGGCGC CCTGGTCGAC CTGGAAAAGG AACGCAAGGC TGCCAAGAGC
AAGCCGACCC GGGCAGAGCT TGCGCAACTG TTCACCAGCC GCAACCTGTG GGCGGTGTAC
CTTGGCCAGT ACTGCATCAC TGCGCTGACT TACTTCTTCA TCACCTGGTT CCCGATCTAC
CTGATCAAGG GCCGTGGCAT GACCATCATG GAGGCCGGCT GGGTGGCCGC ACTGCCGGCA
ATCTGTGGTT TCACTGGCGG TATTCTGGGT GGCTTCGTAT CCGACTGGCT GATCCGCCGT
GGCGTGCACC CGTCCAGGGC GCGCAAGACC CCGTTCATCA TCGGCATGGG GCTGTCCACC
AGCCTGGTGC TGGCCAACTA TGTGGATGGC AACGCGGCGG TCATAGCCCT GATGACCCTG
GCGTTCTTCG GCAAGGGCCT GGCTGCGGTG GGCTGGGCGG TGCTGTCGGA CGTGGCGCCG
AAGAAGATGG TCGGCCTGTG CGGTGGCGTG TTCAATGGCA TCGGCAACAT TGCCGGCATC
GTCACCCCGT TGGTGATTGG TTACGTGGTT GCCAGCACCG GCTCGTTTCA CAACGCACTC
TGGTTCGTGG CCGCCCATGG CGTGCTGGGG ATCCTCGCTT ACCTGTTGCT GGCCAGGCGC
TTCGAGCGTA CCGGGCAGGC GTAG
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| Protein sequence | MNSKSAVAAP QAVAGIGRHR FLVLALIFVI TVINYADRAT LSITGTEVLK DLGLDPVMLG
MIFSAFAWAY TLGQVPGGWL LDRFGARRVY GISLILWSLF TLLQGTVGWM GLAGVSAAVA
LFSMRFMLGL VESPAFPANS RIVSCWFPTQ ERGTASALFN SAQYMAVVVF APLMAWMTHA
MSWEQVFIWM GLLGLLLSLF WFRLYHEPHS APGLSREELE YMREGGALVD LEKERKAAKS
KPTRAELAQL FTSRNLWAVY LGQYCITALT YFFITWFPIY LIKGRGMTIM EAGWVAALPA
ICGFTGGILG GFVSDWLIRR GVHPSRARKT PFIIGMGLST SLVLANYVDG NAAVIALMTL
AFFGKGLAAV GWAVLSDVAP KKMVGLCGGV FNGIGNIAGI VTPLVIGYVV ASTGSFHNAL
WFVAAHGVLG ILAYLLLARR FERTGQA
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