Gene Pput_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4572 
Symbol 
ID5192911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5115375 
End bp5115725 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content54% 
IMG OID640589052 
Producttransport-associated 
Protein accessionYP_001269876 
Protein GI148549774 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.414411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.472278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TCGCCATTGC TGCCGCTACT GCTACCGCTC TGACCCTGAC CATGGCTAAC 
GGTGCATTCG CCGCTGAGCC AACCCAGGCT CCAGTCATGT TGGCGGCCAA CACCGTCGAC
AACGCCAAGC AAGAAGGCTC CGACACTTGG ATCACTACCA AGGTTAAAGC TGATCTGCTG
ACTGAAAAAG GCATCCCAGG CAGCGACATC AAAGTCGAGA CCAGCCAAGG TGTTGTTTCG
CTGTCTTCTG ATGTGAAGGT TACCGAATCG CAGAAAGCAG AAGCGGTGCG CATCACCAAG
AACATCAAAG GCGTCAAGAG CGTAATGTCT GACGGCCTGA AAGCCGAGTA A
 
Protein sequence
MKKFAIAAAT ATALTLTMAN GAFAAEPTQA PVMLAANTVD NAKQEGSDTW ITTKVKADLL 
TEKGIPGSDI KVETSQGVVS LSSDVKVTES QKAEAVRITK NIKGVKSVMS DGLKAE