Gene Pput_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4495 
Symbol 
ID5193632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5018581 
End bp5018922 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID640588970 
ProductHopJ type III effector protein 
Protein accessionYP_001269799 
Protein GI148549697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACC TGAATACCCT GCGCGCAAGC CTGGCCAGCG GCCAACATGT ATTTGCCGAT 
ACCTTGGCGT TCATTGCCGA CAACTACAGC TACCAGCCGC AGGCCTTCAA CAACGGCGGC
GTGGAGAATG CGGCAGGGCA GAACGAAGGT TCGTGCAAAA CCTTGGGCCT GGCCTTGCTT
GAAGGGCTGA GCGACCAGGA AGCGCTGCTG GCCTTCGGCG AGCACTACCG TGATGTGGTG
GCCACGCCTG AGGGCAGCGA CCATGGCAAC ATCCGTGCGC TGATCAAACA CGGTCTGGCG
GGTGTGAAGT TTGCTGCGCA GCCGCTTGCG CGCAAGGCTT GA
 
Protein sequence
MTDLNTLRAS LASGQHVFAD TLAFIADNYS YQPQAFNNGG VENAAGQNEG SCKTLGLALL 
EGLSDQEALL AFGEHYRDVV ATPEGSDHGN IRALIKHGLA GVKFAAQPLA RKA