Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4495 |
Symbol | |
ID | 5193632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5018581 |
End bp | 5018922 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640588970 |
Product | HopJ type III effector protein |
Protein accession | YP_001269799 |
Protein GI | 148549697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGACC TGAATACCCT GCGCGCAAGC CTGGCCAGCG GCCAACATGT ATTTGCCGAT ACCTTGGCGT TCATTGCCGA CAACTACAGC TACCAGCCGC AGGCCTTCAA CAACGGCGGC GTGGAGAATG CGGCAGGGCA GAACGAAGGT TCGTGCAAAA CCTTGGGCCT GGCCTTGCTT GAAGGGCTGA GCGACCAGGA AGCGCTGCTG GCCTTCGGCG AGCACTACCG TGATGTGGTG GCCACGCCTG AGGGCAGCGA CCATGGCAAC ATCCGTGCGC TGATCAAACA CGGTCTGGCG GGTGTGAAGT TTGCTGCGCA GCCGCTTGCG CGCAAGGCTT GA
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Protein sequence | MTDLNTLRAS LASGQHVFAD TLAFIADNYS YQPQAFNNGG VENAAGQNEG SCKTLGLALL EGLSDQEALL AFGEHYRDVV ATPEGSDHGN IRALIKHGLA GVKFAAQPLA RKA
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