Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4467 |
Symbol | |
ID | 5194571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4995308 |
End bp | 4995892 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588942 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001269771 |
Protein GI | 148549669 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCTG TGAGCGAGCC GAGGGATATC ATCGAACCTG ACGCTGACAG CGCAGGCGCG CGTGCGCGTT TCGTCCAGGT GTTCCAGGCC CAGCGTGCGC GTATGGAGGC GTTGGTAAGC CGTCGGGTCG GCTGCCGCGC CACCGCTTCG GACCTGGTCC AAGAGCTGTT CCTGCGTTTC TGGCGTCGCC CCGAGGTCAA GGTCGAGGCG CTGGACACTT ACCTGCTGCG TTGCGCGGGC AACCTGGCCA TAGACCACCT GCGCAGCGAA AGTAGCCGCG AACGCGTGGC CGAAGCCGCT GTGCCGGTGA ATGAGGCGAG CCTGGCCCAG GCCCCTGAGC AGGCCGTGGA GGTCGACCAC GACTTGCAGC GTATCGAGGC CACCTTGCGT GCCTTGCCCG AACGCACCCG GCAGATCTTC CTGCTCAACC GCATTCACGG CTGCAAGTAC AGCGAGATCG CCAAAGCCAT GCAGCTGTCC CAGAGCGCCG TGGAAAAGCA TATGATGCGC GCCCTCGAAG CGTGCAAGGC GAGTGTTGCC GAGCCCGCGT CCACCCCACG CCGGCCAGGG AGCGCCCGTC GATGA
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Protein sequence | MIPVSEPRDI IEPDADSAGA RARFVQVFQA QRARMEALVS RRVGCRATAS DLVQELFLRF WRRPEVKVEA LDTYLLRCAG NLAIDHLRSE SSRERVAEAA VPVNEASLAQ APEQAVEVDH DLQRIEATLR ALPERTRQIF LLNRIHGCKY SEIAKAMQLS QSAVEKHMMR ALEACKASVA EPASTPRRPG SARR
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