Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4455 |
Symbol | |
ID | 5192517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4980955 |
End bp | 4981860 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588930 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001269759 |
Protein GI | 148549657 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.345446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTC CGGACATGAA CCTGCTTGTC GCCCTCGATG CCTTGCTCGA CGAGGGCAGC GTGGTTGGCG CGGCGCAACG CATGAACCTG AGCCCGGCAG CCATGAGCCG GACCCTGGGG CGTATCCGCG AAGCGCTGGG TGACCCGATC CTGGTGCGGG CCGGCCGTGG CCTGGTGCCG ACGCCGCGTG CGCTGGCCTT GCGCGAGCAG GTGCATGGCC TGGTGGAGCA GGCCGGGCAG GTATTTCGCA GTCGCGACGA TGTCGACCTG GTGAACCTGG ACCGTGCCTT CAACATCCGC ACCAATGACC TGTTCATCGC CCTGTATGGC GCTCAGTTGT TGCGCATGAT GCTGGCCCAG GCACCGCATA CGGTGCTGCG TTTTGTGCCG GAGGGCAGCG GCGACGATGA TGCGGTGCTG CGCAATGGCC AAATCGACTT GATCATCAGT TCAGCCATTG AACTGGGCCC CGAAATCAAG GTTCAGAGCC TGTTCAACAC CTACTTCGTG GGCTTGGCGC GTGAAGGGCA CCCGGTTTTC GATGACGAGA TCACCCCTGA GCGCTTCGCC GCCTACCCGC ACATCAGCGT GTCACGCCGT GGCCGTGCCA ATGGGCCTAT CGACGTGGCA CTGGCCAATT ACAAGGTGGA GCGCCGGGTA GCGCTGATCA CGACGAGTTT TCACTCCGCG ATGTTTTCGC TGCCGGACTC GGACCTGATC TTGCCGATAC CCGCCAATAT CCTGAACAGT GTGAACAGGC TGAAACTGCC ATTGAGGTCC TTCGAGATCC CCGTGCCACT GGAAAAGGTC AATGTCATGC AGGCATGGCA CCCGCGGTTC GATAACGACC CGGCCCATCG CTGGCTGCGG CAGACGTTGA AGGCGTGCGG CAGGATGGAC CCTTGA
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Protein sequence | MQLPDMNLLV ALDALLDEGS VVGAAQRMNL SPAAMSRTLG RIREALGDPI LVRAGRGLVP TPRALALREQ VHGLVEQAGQ VFRSRDDVDL VNLDRAFNIR TNDLFIALYG AQLLRMMLAQ APHTVLRFVP EGSGDDDAVL RNGQIDLIIS SAIELGPEIK VQSLFNTYFV GLAREGHPVF DDEITPERFA AYPHISVSRR GRANGPIDVA LANYKVERRV ALITTSFHSA MFSLPDSDLI LPIPANILNS VNRLKLPLRS FEIPVPLEKV NVMQAWHPRF DNDPAHRWLR QTLKACGRMD P
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