| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4299 |
|---|
| Symbol | |
|---|
| ID | 5190619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4808255 |
|---|
| End bp | 4809067 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640588776 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_001269607 |
|---|
| Protein GI | 148549505 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.729715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA ACAAGCTGGC CGAGTTGGTT CAAGCACAAT TGCTCGACGC CATCGAAAAG
GATGACCTGG TCCTGCCAAC CCTGCCCGAG GTTGCCTTGA GCATCCGCGA AGCAGCGGAA
GACAACGAGA TCAGCGTAGC GGCCCTGAGC AAGGTGATCG GCCGCGACGC GGCCCTTTCA
GCGCGCCTGA TCAAGGTCGT CAACAGCCCA CTGCTGCGTG CTGCGGTCGA GGTGACCGAC
CTGCATACCG CCATCACGCG GCTAGGCATC AACTACAGCT GCAACCTGGC CATCGGCCTG
GTGATCGAGC AGATTTTCCA TGCCCGCTCG CCGGCAGTCG AGCAGAAACT GCGCGATATC
TGGGCCAGTA GCCTGGAAGT GGCGGGCATC AGCTACGAAA TCTGCCGTCG CTTTACACCT
CTGAAGCCTG ACCAGGCCAC CTTGGGTGGG CTGGTCAACC AGATTGGCGC GCTGCCGGTA
CTCATCTATG CCGAAGAGCA CAACGAACTG TTGTCCGACC CGGTTTGCCT GCATTACGTG
ATCGAGCAAC TCCAGCCGGT GCTGGGGGAC AAGATCCTCA AGGCCTGGGA GTTTCCGGAG
CAGTTGGTCA ACCTGCCGAG CCAGGTTCAT GACCTGGACC GCCAGACTGA CAAGATCGAT
TACATTGACA TCGTGCAGAT CGCCCGCTGC ATCAGTCAGC GCGGGCGCCA CCGGCCATTG
GCTGCGCTGC CGGCTTACCG CCATCTGGGT CTGCCGTTCG GCACCGAGCT GGAGGTCGAT
GAACTGCTAG AGGCGCGGAG CATGTTGCGC TGA
|
|---|
| Protein sequence | MPMNKLAELV QAQLLDAIEK DDLVLPTLPE VALSIREAAE DNEISVAALS KVIGRDAALS
ARLIKVVNSP LLRAAVEVTD LHTAITRLGI NYSCNLAIGL VIEQIFHARS PAVEQKLRDI
WASSLEVAGI SYEICRRFTP LKPDQATLGG LVNQIGALPV LIYAEEHNEL LSDPVCLHYV
IEQLQPVLGD KILKAWEFPE QLVNLPSQVH DLDRQTDKID YIDIVQIARC ISQRGRHRPL
AALPAYRHLG LPFGTELEVD ELLEARSMLR
|
|---|
| |