Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4242 |
Symbol | |
ID | 5194816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4745753 |
End bp | 4746085 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640588719 |
Product | HicB family protein |
Protein accession | YP_001269550 |
Protein GI | 148549448 |
COG category | [S] Function unknown |
COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTAA TGACTTACCG CGGATACGCC GCTCGTATCG AATACAGCGA CGAAGACCAG TTGTTGATCG GCCATGTCGC CGGTATTCGC GACGTGATAG GTTTTCATGG CGAATCAATC AGTGAGTTGC GCCAGGCATT TGAAGAAGCC GTTGACGATT ATCTTGAGAC TTGCGAACGC CTTGGGCGGG AACCGCAGAA AACGTATTCC GGCAAACTCA GCCTGCGCCT TGAGCCTACC CTTCACGCCA GTGTGGCGGC CAAGGCCGAG CTGGCTGAAA AAAGCATCAA CCAATGGGTA AGCGATATTC TCAGCAAGGC TGCCTATAGC TGA
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Protein sequence | MNVMTYRGYA ARIEYSDEDQ LLIGHVAGIR DVIGFHGESI SELRQAFEEA VDDYLETCER LGREPQKTYS GKLSLRLEPT LHASVAAKAE LAEKSINQWV SDILSKAAYS
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