Gene Pput_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4242 
Symbol 
ID5194816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4745753 
End bp4746085 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content53% 
IMG OID640588719 
ProductHicB family protein 
Protein accessionYP_001269550 
Protein GI148549448 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA TGACTTACCG CGGATACGCC GCTCGTATCG AATACAGCGA CGAAGACCAG 
TTGTTGATCG GCCATGTCGC CGGTATTCGC GACGTGATAG GTTTTCATGG CGAATCAATC
AGTGAGTTGC GCCAGGCATT TGAAGAAGCC GTTGACGATT ATCTTGAGAC TTGCGAACGC
CTTGGGCGGG AACCGCAGAA AACGTATTCC GGCAAACTCA GCCTGCGCCT TGAGCCTACC
CTTCACGCCA GTGTGGCGGC CAAGGCCGAG CTGGCTGAAA AAAGCATCAA CCAATGGGTA
AGCGATATTC TCAGCAAGGC TGCCTATAGC TGA
 
Protein sequence
MNVMTYRGYA ARIEYSDEDQ LLIGHVAGIR DVIGFHGESI SELRQAFEEA VDDYLETCER 
LGREPQKTYS GKLSLRLEPT LHASVAAKAE LAEKSINQWV SDILSKAAYS