| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4134 |
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| Symbol | |
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| ID | 5192416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4637208 |
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| End bp | 4637591 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588611 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001269442 |
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| Protein GI | 148549340 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.003852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.140965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA TCACTATCGG CGCATGGATA GGCCACCTTG GCCGAGGCCT GGCGCCTCGC
GAATTGCAAT GCATCCTCGA TGTCGCCCAG GGCTTCACCA CCAAGGAGAT AGCCAGGCAC
TTCGGCATCA GCGAAAGCGG TGTCGAGAAG CGCATCGGCG ACGCCATGTT GAAGCTGGGT
GTGGCCCGTC GCGCCGCAGC CGTGGCCGAA GCCATGCGCC GCCAGATCAT CAGCCCGCTC
TGCATCGCCT TGGCCGCCCT CATCACCATG CACGCGGTGA TCGATGACAG CGACCCAATG
CGCCGCGATC GCCGCACGCC GGAGCGCCGC ACCGCCCAAG TTCGAATCGT TCGCAAGGCC
GAAGCCTTCG AGCTCCACGC CTGA
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| Protein sequence | MDTITIGAWI GHLGRGLAPR ELQCILDVAQ GFTTKEIARH FGISESGVEK RIGDAMLKLG
VARRAAAVAE AMRRQIISPL CIALAALITM HAVIDDSDPM RRDRRTPERR TAQVRIVRKA
EAFELHA
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