Gene Pput_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4024 
Symbol 
ID5193915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4539055 
End bp4540269 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID640588501 
Productmajor facilitator transporter 
Protein accessionYP_001269332 
Protein GI148549230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.959779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCTCGG CAAACCCGCA CAACAAGGAC GTGGCAATGC TCGCCGCCAT AAAACGCTAC 
CCGCACACCG TTCGCCTGCT GCTCACCACC ACCTTCACGC TTACCGTCGC CCGCGCCCTC
ACCCTGCCCT ACCTGGTGGT TTACCTGGCC GACAATTTCC AGCTGCCGAT CAGCCAGATC
GGTCTGCTGA TCGGTGGCGC GCTGATCGTC GCCTCGCTGT TGAGTCTGTA CGGTGGTCAT
CTGGTCGACA CCTTGAGCAA CCACACGCTG GTCAGCGCCA GTACCCTGCT GTTCGCCCTG
GCCTTCGTCG GCGCGGTCGC CAGCCGTTCG GCACTGCCGT TCTTCTTTTG TCTGGTGTTG
ATCAACCTGG CCCTGGCAGT GGTCGACATT GCTGCCAAGG CGGGCTTCTG CGCGTTACTG
CCGGTGGATG AGCGGGCCGA GGTATTCGCC ATCAAGTACA CCCTCAGCAA CGTCGGCTAC
GCCGCCGGCC CGTTGCTGGG CGTGGCCATG CTTGAACTGA ACGACCATGT GCCGTTCCTC
GCCTCTGCCC TGCTTGGCCT GGCCATGTGC CTGGCTTACT GGCGCCTGGG TGATCGCAGC
CTGCAGGCCA GCGCGCCGGA CAAACCTGCG GCCGGCTTCG GCCAAGTGGC GCTGGGGCTG
GCGCGGGATC GCCGGCTGGT GTGCTTTACC GTGGGTGGGG TGCTGAGCGC GGTGGTGTTC
GGCCAGTTCA CCGCCTACCT GTCCCAGTAC CTGGTGGTCA CCAGCAACCC GGCCGAAGCG
GCACGGCTGA TCGGCTATCT GGTCACCACC AACGCCGTGA CGGTCATTGC CTTGCAGTAC
CTGATTGGCC GGCGCATCAG CCGCCAGCGC CTGATGCCGT GGCTGTTGGC CGGTATGGGC
CTGTTCATCG CCGGCTTGCT GGGTTTTGCG CTGGCGGGCT CGGTACTGGC CTGGTGCCTG
GCGATGCTGG TGTTCACGCT GGGCGAAATC ATCGTGATCC CGGCCGAGTA CATGTTTATC
GACCTGATCG CACCGGAGCA CTTGCGCGGG GTGTATTACG GCGCGCAGAA CCTGTCCAAC
CTGGGGGCCG CGCTGGGGCC GGTGATGGTG GGGTTTGCAC TGGTACACCT GTGGCCGGGG
GCAGTCTTCT ACCTGCTGGT GTTGTCGGTG ATACTGGCAG GGGTGTTCTA TGGGTTGGGT
ACCCGCAGGG GTTGA
 
Protein sequence
MCSANPHNKD VAMLAAIKRY PHTVRLLLTT TFTLTVARAL TLPYLVVYLA DNFQLPISQI 
GLLIGGALIV ASLLSLYGGH LVDTLSNHTL VSASTLLFAL AFVGAVASRS ALPFFFCLVL
INLALAVVDI AAKAGFCALL PVDERAEVFA IKYTLSNVGY AAGPLLGVAM LELNDHVPFL
ASALLGLAMC LAYWRLGDRS LQASAPDKPA AGFGQVALGL ARDRRLVCFT VGGVLSAVVF
GQFTAYLSQY LVVTSNPAEA ARLIGYLVTT NAVTVIALQY LIGRRISRQR LMPWLLAGMG
LFIAGLLGFA LAGSVLAWCL AMLVFTLGEI IVIPAEYMFI DLIAPEHLRG VYYGAQNLSN
LGAALGPVMV GFALVHLWPG AVFYLLVLSV ILAGVFYGLG TRRG