Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4024 |
Symbol | |
ID | 5193915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4539055 |
End bp | 4540269 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588501 |
Product | major facilitator transporter |
Protein accession | YP_001269332 |
Protein GI | 148549230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.959779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCTCGG CAAACCCGCA CAACAAGGAC GTGGCAATGC TCGCCGCCAT AAAACGCTAC CCGCACACCG TTCGCCTGCT GCTCACCACC ACCTTCACGC TTACCGTCGC CCGCGCCCTC ACCCTGCCCT ACCTGGTGGT TTACCTGGCC GACAATTTCC AGCTGCCGAT CAGCCAGATC GGTCTGCTGA TCGGTGGCGC GCTGATCGTC GCCTCGCTGT TGAGTCTGTA CGGTGGTCAT CTGGTCGACA CCTTGAGCAA CCACACGCTG GTCAGCGCCA GTACCCTGCT GTTCGCCCTG GCCTTCGTCG GCGCGGTCGC CAGCCGTTCG GCACTGCCGT TCTTCTTTTG TCTGGTGTTG ATCAACCTGG CCCTGGCAGT GGTCGACATT GCTGCCAAGG CGGGCTTCTG CGCGTTACTG CCGGTGGATG AGCGGGCCGA GGTATTCGCC ATCAAGTACA CCCTCAGCAA CGTCGGCTAC GCCGCCGGCC CGTTGCTGGG CGTGGCCATG CTTGAACTGA ACGACCATGT GCCGTTCCTC GCCTCTGCCC TGCTTGGCCT GGCCATGTGC CTGGCTTACT GGCGCCTGGG TGATCGCAGC CTGCAGGCCA GCGCGCCGGA CAAACCTGCG GCCGGCTTCG GCCAAGTGGC GCTGGGGCTG GCGCGGGATC GCCGGCTGGT GTGCTTTACC GTGGGTGGGG TGCTGAGCGC GGTGGTGTTC GGCCAGTTCA CCGCCTACCT GTCCCAGTAC CTGGTGGTCA CCAGCAACCC GGCCGAAGCG GCACGGCTGA TCGGCTATCT GGTCACCACC AACGCCGTGA CGGTCATTGC CTTGCAGTAC CTGATTGGCC GGCGCATCAG CCGCCAGCGC CTGATGCCGT GGCTGTTGGC CGGTATGGGC CTGTTCATCG CCGGCTTGCT GGGTTTTGCG CTGGCGGGCT CGGTACTGGC CTGGTGCCTG GCGATGCTGG TGTTCACGCT GGGCGAAATC ATCGTGATCC CGGCCGAGTA CATGTTTATC GACCTGATCG CACCGGAGCA CTTGCGCGGG GTGTATTACG GCGCGCAGAA CCTGTCCAAC CTGGGGGCCG CGCTGGGGCC GGTGATGGTG GGGTTTGCAC TGGTACACCT GTGGCCGGGG GCAGTCTTCT ACCTGCTGGT GTTGTCGGTG ATACTGGCAG GGGTGTTCTA TGGGTTGGGT ACCCGCAGGG GTTGA
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Protein sequence | MCSANPHNKD VAMLAAIKRY PHTVRLLLTT TFTLTVARAL TLPYLVVYLA DNFQLPISQI GLLIGGALIV ASLLSLYGGH LVDTLSNHTL VSASTLLFAL AFVGAVASRS ALPFFFCLVL INLALAVVDI AAKAGFCALL PVDERAEVFA IKYTLSNVGY AAGPLLGVAM LELNDHVPFL ASALLGLAMC LAYWRLGDRS LQASAPDKPA AGFGQVALGL ARDRRLVCFT VGGVLSAVVF GQFTAYLSQY LVVTSNPAEA ARLIGYLVTT NAVTVIALQY LIGRRISRQR LMPWLLAGMG LFIAGLLGFA LAGSVLAWCL AMLVFTLGEI IVIPAEYMFI DLIAPEHLRG VYYGAQNLSN LGAALGPVMV GFALVHLWPG AVFYLLVLSV ILAGVFYGLG TRRG
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