| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3932 |
|---|
| Symbol | |
|---|
| ID | 5193652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4430922 |
|---|
| End bp | 4431842 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640588405 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001269240 |
|---|
| Protein GI | 148549138 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0299205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.191145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA ATCTGCCACA GGTTGCAGTG CTGTTGGCTG CATACAACGG AATGTCTTGG
ATCGAGGAGC AACTCGCCTC GATCCTTTCG CAAACCAATG TTCACGTAAG CATCTTCATC
AGCGTTGATC CTTCCAGTGA TGGTACCGAA GGCTGGTGCG CTGATTACGC TGCGGGGCAC
GAGAGTGTAT TCGTATTGCC ACCAGCAGGC CCATTTGGCG GCGCTGCCCC CAACTTCTTC
CGGCTGATCC GAGATGTCGA TTTTTCGACG TTCGACTACT TATCTTTTTC CGATCAAGAC
GATATCTGGT ATCCGGACAA GCTTGAGAGA GCTGTCGCGC AACTGCGAAC AGGCAACTTC
GATGGTTACT CAAGCAATGT AGTCGCTTTT TGGCCCGACG GCCGTCGTTT ACTGGTGGAC
AAGGCGCAAC CTCAGGTGGC ATGGGACTAT TTGTTTGAAG CCGCGGGTCC AGGTTGCACT
TACGTTCTGA CTCAGAAATT GGCGGCTGCG CTGAAGCGTT TGATAGCCCA GCGCTGGGAG
GCAGTGCAAA ATGTCGCGCT ACACGACTGG TTCTGCTATG CCTACGCGCG CAGTGCAGGG
TACAGATGGT TCATTGATCC GGTTCCGAGA ATGGATTACC GCCAGCACCT GAAAAATCAG
GTAGGGGTGA ACGCGGGTCT GCGCTCGGCG ATTTCGCGAG TCAGGCAGGT TGTACAAGGT
TGGTGGTTTT CTCAGGTCAA ACTCATACGT GAGCTAACGC TCGACACCCA TTGCCAGGAT
GCAGTCCCAA AGAGCCTTAA GTGTTCCGGG CGGATTTTGT TTCTGAGGTT GATGATACGC
GCACAAGAAT GTCGGCGGCG CCGGCGTGAC CAGTTTGCAT TTGTGGTGCT GTGCATGCTC
AGCGCATTGT TCAGGCACTA A
|
|---|
| Protein sequence | MADNLPQVAV LLAAYNGMSW IEEQLASILS QTNVHVSIFI SVDPSSDGTE GWCADYAAGH
ESVFVLPPAG PFGGAAPNFF RLIRDVDFST FDYLSFSDQD DIWYPDKLER AVAQLRTGNF
DGYSSNVVAF WPDGRRLLVD KAQPQVAWDY LFEAAGPGCT YVLTQKLAAA LKRLIAQRWE
AVQNVALHDW FCYAYARSAG YRWFIDPVPR MDYRQHLKNQ VGVNAGLRSA ISRVRQVVQG
WWFSQVKLIR ELTLDTHCQD AVPKSLKCSG RILFLRLMIR AQECRRRRRD QFAFVVLCML
SALFRH
|
|---|
| |